RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 DEFB103AP81534 67 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
TM2D3-208ENST00000559891 PSMD6Q15008 389 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 FAM117BQ6P1L5 589 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 ALKAL1Q6UXT8 129 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 ZNF365Q70YC5 407 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 SLC24A5Q71RS6 500 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 TMEM199Q8N511 208 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 BAG1Q99933 345 aaPredicted RBP12.53□□□□□ -0.4
TM2D3-208ENST00000559891 HTATIP2Q9BUP3 242 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 NDST4Q9H3R1 872 aa12.53□□□□□ -0.4
TM2D3-208ENST00000559891 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
TM2D3-208ENST00000559891 TTC3P53804 2025 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 PTGESO14684 152 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 B4GALT3O60512 393 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 CAPN15O75808 1086 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 FGFR1OPO95684 399 aaKnown RBP12.52□□□□□ -0.4
TM2D3-208ENST00000559891 MAN2A1Q16706 1144 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 VWA3BQ502W6 1294 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 CLLU1OSQ5K130 101 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 TMCO3Q6UWJ1 677 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 INTS8Q75QN2 995 aaKnown RBP12.52□□□□□ -0.4
TM2D3-208ENST00000559891 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 SNX27Q96L92 541 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.4
TM2D3-208ENST00000559891 MTMR12Q9C0I1 747 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.4
TM2D3-208ENST00000559891 A0A1B0GTH6 734 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 ZNF623O75123 536 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 GNA14O95837 355 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 CST3P01034 146 aaPredicted RBP12.52□□□□□ -0.41
TM2D3-208ENST00000559891 POMCP01189 267 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 ITGA4P13612 1032 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 TNNI1P19237 187 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 FAM189BP81408 668 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 TFAMQ00059 246 aaKnown RBP12.52□□□□□ -0.41
TM2D3-208ENST00000559891 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 KCNMA1Q12791 1236 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 NR1I3Q14994 352 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 MRPL10Q7Z7H8 261 aaKnown RBP12.52□□□□□ -0.41
TM2D3-208ENST00000559891 FAM114A1Q8IWE2 563 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 TC2NQ8N9U0 490 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 SEMA4DQ92854 862 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 CCDC51Q96ER9 411 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 TRAIPQ9BWF2 469 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 KIAA1586Q9HCI6 787 aa12.52□□□□□ -0.41
TM2D3-208ENST00000559891 SMIM28A0A1B0GU29 152 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 PPEF2O14830 753 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 KIAA0391O15091 583 aaKnown RBP12.51□□□□□ -0.41
TM2D3-208ENST00000559891 KRT13P13646 458 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 PLA2G4AP47712 749 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 FMO5P49326 533 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 SCNN1GP51170 649 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 TDRD10Q5VZ19 366 aaKnown RBP12.51□□□□□ -0.41
TM2D3-208ENST00000559891 CNKSR3Q6P9H4 555 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 SV2AQ7L0J3 742 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 TAS1R2Q8TE23 839 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 PAAF1Q9BRP4 392 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 CARD6Q9BX69 1037 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 METTL14Q9HCE5 456 aaKnown RBP12.51□□□□□ -0.41
TM2D3-208ENST00000559891 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
TM2D3-208ENST00000559891 F8W810 466 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 EPHB6O15197 1021 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 MAPK13O15264 365 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 VNN1O95497 513 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 ACTN1P12814 892 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 SLC9A1P19634 815 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 CLDN10P78369 228 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 UBXN1Q04323 297 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 FPGSQ05932 587 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 PPP2R3AQ06190 1150 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 IKBKEQ14164 716 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 GPIHBP1Q8IV16 184 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 TMC2Q8TDI7 906 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 FTHL17Q9BXU8 183 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 LGALS16A8MUM7 142 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
TM2D3-208ENST00000559891 C4BPAP04003 597 aaKnown RBP12.5□□□□□ -0.41
TM2D3-208ENST00000559891 CASQ1P31415 396 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
TM2D3-208ENST00000559891 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
TM2D3-208ENST00000559891 NAB2Q15742 525 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 TMEM240Q5SV17 173 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 C9orf50Q5SZB4 431 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 SPOPLQ6IQ16 392 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 GJB7Q6PEY0 223 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 C1orf127Q8N9H9 656 aa12.5□□□□□ -0.41
TM2D3-208ENST00000559891 CXorf38Q8TB03 319 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms