RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 DRC1Q96MC2 740 aa20.59■□□□□ 0.89
CDC42BPB-206ENST00000559790 RAB34Q9BZG1 259 aa20.59■□□□□ 0.89
CDC42BPB-206ENST00000559790 TBC1D17Q9HA65 648 aa20.59■□□□□ 0.89
CDC42BPB-206ENST00000559790 FBXL21Q9UKT6 434 aa20.59■□□□□ 0.89
CDC42BPB-206ENST00000559790 CDH7Q9ULB5 785 aa20.59■□□□□ 0.89
CDC42BPB-206ENST00000559790 STK24Q9Y6E0 443 aa20.59■□□□□ 0.89
CDC42BPB-206ENST00000559790 CACNA1AO00555 2505 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 NPHP3-ACAD11A0A0J9YXS1 232 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 WDR27A2RRH5 827 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 PODXLO00592 558 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 ST18O60284 1047 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 FAM189A1O60320 539 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 GLULP15104 373 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 GJB2P29033 226 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 CACNB1Q02641 598 aaPredicted RBP20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 MRPL58Q14197 206 aaKnown RBP20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 SLC10A6Q3KNW5 377 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 RILPL1Q5EBL4 403 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 PDXDC1Q6P996 788 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 SYT2Q8N9I0 419 aaPredicted RBP20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 PLIN2Q99541 437 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 CCDC94Q9BW85 323 aaPredicted RBP20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 IRF2BPLQ9H1B7 796 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 C17orf75Q9HAS0 396 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 TUBGCP4Q9UGJ1 667 aa20.58■□□□□ 0.89
CDC42BPB-206ENST00000559790 ABLIM3O94929 683 aa20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 PLS3P13797 630 aa20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 GRIN1Q05586 938 aa20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 ANGPT1Q15389 498 aa20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 VARS2Q5ST30 1063 aaKnown RBP20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 RTP3Q9BQQ7 232 aa20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 ARHGEF3Q9NR81 526 aa20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 TOPORSQ9NS56 1045 aaPredicted RBP20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 DAXXQ9UER7 740 aaPredicted RBP20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 RBM19Q9Y4C8 960 aaKnown RBP20.57■□□□□ 0.88
CDC42BPB-206ENST00000559790 CEP250Q9BV73 2442 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 ARHGEF37A1IGU5 675 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 VWA3AA6NCI4 1184 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 SHISA7A6NL88 538 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 SEC24AO95486 1093 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 NCKAP1LP55160 1127 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 NOLC1Q14978 699 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 MCTP1Q6DN14 999 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 ANKS3Q6ZW76 656 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 FIZ1Q96SL8 496 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 TIPINQ9BVW5 301 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 BLOC1S4Q9NUP1 217 aa20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 ZFP37Q9Y6Q3 630 aaPredicted RBP20.56■□□□□ 0.88
CDC42BPB-206ENST00000559790 LRRN2O75325 713 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 TOM1L1O75674 476 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 VNN2O95498 520 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 HARSP12081 509 aaKnown RBP20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 GPC5P78333 572 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 MCL1Q07820 350 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 UVSSAQ2YD98 709 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 ZBTB41Q5SVQ8 909 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 ARL6IP4Q66PJ3 421 aaKnown RBP20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 PHLDB3Q6NSJ2 640 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 ING5Q8WYH8 240 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 SUSD3Q96L08 255 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 DDX23Q9BUQ8 820 aaKnown RBP20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 FOXQ1Q9C009 403 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 ANKFY1Q9P2R3 1169 aa20.55■□□□□ 0.88
CDC42BPB-206ENST00000559790 NCANO14594 1321 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 TTC26A0AVF1 554 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 PLA2G4BP0C869 781 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 CXCL8P10145 99 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 CEBPBP17676 345 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 FCARP24071 287 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 TNFSF9P41273 254 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 CCR2P41597 374 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 YARSP54577 528 aaKnown RBP20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 ZBTB6Q15916 424 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 PABPC1LQ4VXU2 614 aaKnown RBP20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 PRSS36Q5K4E3 855 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 SLC39A4Q6P5W5 647 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 ZPBP2Q6X784 338 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 APBB1IPQ7Z5R6 666 aaPredicted RBP20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 ACAP3Q96P50 834 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 KXD1Q9BQD3 176 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 REEP2Q9BRK0 252 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 AVENQ9NQS1 362 aaPredicted RBP20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 SLC38A7Q9NVC3 462 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 FBXL5Q9UKA1 691 aa20.54■□□□□ 0.88
CDC42BPB-206ENST00000559790 SYN3O14994 580 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 XYLBO75191 536 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 RHOP08100 348 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 ZNF131P52739 623 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 STARD6P59095 220 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 ZRSR1Q15695 479 aaKnown RBP20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 PJA1Q8NG27 643 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 ZNF461Q8TAF7 563 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 PLA2G2FQ9BZM2 168 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 KCNH3Q9ULD8 1083 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 POLIQ9UNA4 740 aa20.53■□□□□ 0.88
CDC42BPB-206ENST00000559790 PIGRP01833 764 aa20.52■□□□□ 0.88
CDC42BPB-206ENST00000559790 DCNP07585 359 aaKnown RBP20.52■□□□□ 0.88
CDC42BPB-206ENST00000559790 AARSP49588 968 aaKnown RBP eCLIP20.52■□□□□ 0.88
CDC42BPB-206ENST00000559790 SPAG1Q07617 926 aa20.52■□□□□ 0.88
CDC42BPB-206ENST00000559790 RTL10Q7L3V2 364 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms