RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 RSPH3Q86UC2 560 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 PLXDC1Q8IUK5 500 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 NSUN6Q8TEA1 469 aaKnown RBP4.36□□□□□ -1.71
CASC4-210ENST00000559550 CLPTM1LQ96KA5 538 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 GPRC5BQ9NZH0 403 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 TRPM5Q9NZQ8 1165 aa4.36□□□□□ -1.71
CASC4-210ENST00000559550 KIAA0391O15091 583 aaKnown RBP4.35□□□□□ -1.71
CASC4-210ENST00000559550 TEX33O43247 280 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 POMCP01189 267 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 ITGB1P05556 798 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 POU2F2P09086 479 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 TLE1Q04724 770 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 TUBA3CQ13748 450 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 DACT2Q5SW24 774 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 TUBA3EQ6PEY2 450 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 USP45Q70EL2 814 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 DRC7Q8IY82 874 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 PRR18Q8N4B5 295 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 ZNF276Q8N554 614 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 SLC25A43Q8WUT9 341 aaPredicted RBP4.35□□□□□ -1.71
CASC4-210ENST00000559550 GTPBP4Q9BZE4 634 aaKnown RBP4.35□□□□□ -1.71
CASC4-210ENST00000559550 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 ZNF180Q9UJW8 692 aa4.35□□□□□ -1.71
CASC4-210ENST00000559550 USP15Q9Y4E8 981 aaPredicted RBP4.35□□□□□ -1.71
CASC4-210ENST00000559550 CFAP20Q9Y6A4 193 aaKnown RBP4.35□□□□□ -1.71
CASC4-210ENST00000559550 CCDC78A2IDD5 438 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 GRM6O15303 877 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 RPS6KA4O75676 772 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 NCR1O76036 304 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 RECQL4O94761 1208 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 ADH4P08319 380 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 EPHB1P54762 984 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 LRRC41Q15345 812 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 FLYWCH1Q4VC44 716 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 AGAP9Q5VTM2 703 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 GDF7Q7Z4P5 450 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 TPH2Q8IWU9 490 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 ANKRD13AQ8IZ07 590 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 JPH3Q8WXH2 748 aaPredicted RBP4.34□□□□□ -1.71
CASC4-210ENST00000559550 FAM193BQ96PV7 902 aaPredicted RBP4.34□□□□□ -1.71
CASC4-210ENST00000559550 DCLRE1CQ96SD1 692 aaKnown RBP4.34□□□□□ -1.71
CASC4-210ENST00000559550 VRK1Q99986 396 aaPredicted RBP4.34□□□□□ -1.71
CASC4-210ENST00000559550 C11orf54Q9H0W9 315 aaPredicted RBP4.34□□□□□ -1.71
CASC4-210ENST00000559550 CDH19Q9H159 772 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 SLC12A5Q9H2X9 1139 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 ZIM2Q9NZV7 527 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 ANKRD6Q9Y2G4 727 aa4.34□□□□□ -1.71
CASC4-210ENST00000559550 CDHR4A6H8M9 788 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 S100BP04271 92 aaPredicted RBP4.33□□□□□ -1.72
CASC4-210ENST00000559550 CD1AP06126 327 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 CREMQ03060 361 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 SNAPC2Q13487 334 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
CASC4-210ENST00000559550 RAB39AQ14964 217 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 KHDC1Q4VXA5 237 aaKnown RBP4.33□□□□□ -1.72
CASC4-210ENST00000559550 TSHZ3Q63HK5 1081 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 GADL1Q6ZQY3 521 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 LRRC55Q6ZSA7 311 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 RHOUQ7L0Q8 258 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 TTC7BQ86TV6 843 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 ULK2Q8IYT8 1036 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 OR56A1Q8NGH5 318 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 ZNF483Q8TF39 744 aaPredicted RBP4.33□□□□□ -1.72
CASC4-210ENST00000559550 CLIP3Q96DZ5 547 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 NUP88Q99567 741 aaPredicted RBP4.33□□□□□ -1.72
CASC4-210ENST00000559550 ZSWIM1Q9BR11 485 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 MLST8Q9BVC4 326 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 SLC46A2Q9BY10 475 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 NRDE2Q9H7Z3 1164 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 AKIP1Q9NQ31 210 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 KLHL11Q9NVR0 708 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 CALCOCO1Q9P1Z2 691 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 USP25Q9UHP3 1055 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 REXO2Q9Y3B8 237 aaKnown RBP4.33□□□□□ -1.72
CASC4-210ENST00000559550 EID1Q9Y6B2 187 aa4.33□□□□□ -1.72
CASC4-210ENST00000559550 MARCH11A6NNE9 402 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 NT5C1B-RDH14C9J2C7 533 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 PRPF3O43395 683 aaKnown RBP4.32□□□□□ -1.72
CASC4-210ENST00000559550 LPXNO60711 386 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 NDUFA10O95299 355 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 PEX11BO96011 259 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 ELANEP08246 267 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 CT47B1P0C2W7 299 aaPredicted RBP4.32□□□□□ -1.72
CASC4-210ENST00000559550 MAKP20794 623 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 MALP21145 153 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 GCSHP23434 173 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 AKAP5P24588 427 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 ADRA1BP35368 520 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 NOMO3P69849 1222 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 SLFN5Q08AF3 891 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 NOMO2Q5JPE7 1267 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 PPP4R3AQ6IN85 833 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 MRGPREQ86SM8 312 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 RHOT2Q8IXI1 618 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 IL17RDQ8NFM7 739 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 JDP2Q8WYK2 163 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 HPS3Q969F9 1004 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 MVB12AQ96EY5 273 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 LRGUKQ96M69 825 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms