RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 NAMPTP43490 491 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 BRCC3P46736 316 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 RBM25P49756 843 aaKnown RBP9.51□□□□□ -0.89
CLPX-205ENST00000559218 PFKPQ01813 784 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 FZD5Q13467 585 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 UPP1Q16831 310 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 DCAF4L1Q3SXM0 396 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
CLPX-205ENST00000559218 ZBTB41Q5SVQ8 909 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 TANGO2Q6ICL3 276 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 ZBTB44Q8NCP5 570 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 DEPTORQ8TB45 409 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 ATRIPQ8WXE1 791 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 NELL1Q92832 810 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 CLDN23Q96B33 292 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 TCEAL4Q96EI5 215 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 ADPGKQ9BRR6 497 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 POLR3CQ9BUI4 534 aaPredicted RBP9.51□□□□□ -0.89
CLPX-205ENST00000559218 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 HEBP1Q9NRV9 189 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 NCDNQ9UBB6 729 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 PCDHGA2Q9Y5H1 932 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 BACE2Q9Y5Z0 518 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 NOTCH4Q99466 2003 aa9.51□□□□□ -0.89
CLPX-205ENST00000559218 VWA8A3KMH1 1905 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 MAP1BP46821 2468 aaKnown RBP9.5□□□□□ -0.89
CLPX-205ENST00000559218 FANCMQ8IYD8 2048 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 SMIM28A0A1B0GU29 152 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ARHGEF35A5YM69 484 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 SPTLC1O15269 473 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 SEC24AO95486 1093 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 FCARP24071 287 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 CCR2P41597 374 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ARPP19P56211 112 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 OSTNP61366 133 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ROR1Q01973 937 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 GUCY1B3Q02153 619 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ST3GAL1Q11201 340 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 MTAPQ13126 283 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 GRM2Q14416 872 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ZNF174Q15697 407 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ECM1Q16610 540 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 FAM78AQ5JUQ0 283 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 PRSS36Q5K4E3 855 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ZNF852Q6ZMS4 543 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ANKS3Q6ZW76 656 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 CEP120Q8N960 986 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 TMC2Q8TDI7 906 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ZMAT2Q96NC0 199 aaKnown RBP9.5□□□□□ -0.89
CLPX-205ENST00000559218 CORO1BQ9BR76 489 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 ZSCAN32Q9NX65 697 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 GDE1Q9NZC3 331 aa9.5□□□□□ -0.89
CLPX-205ENST00000559218 SMG5Q9UPR3 1016 aaKnown RBP9.5□□□□□ -0.89
CLPX-205ENST00000559218 CFAP47Q6ZTR5 3102 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 ZFHX4Q86UP3 3567 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 ARHGEF37A1IGU5 675 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 WDR27A2RRH5 827 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 PRRG1O14668 218 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 MEFVO15553 781 aaPredicted RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 TRAPPC3O43617 180 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 TBC1D4O60343 1298 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 LILRB5O75023 590 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 ABLIM3O94929 683 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 TDGF1P13385 188 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 PTPN2P17706 415 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 TGM1P22735 817 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 RPA1P27694 616 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 RPS9P46781 194 aaKnown RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 EFNA5P52803 228 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 ATXN1P54253 815 aaKnown RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 TRIM29Q14134 588 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 ANKRD1Q15327 319 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 SLC8B1Q6J4K2 584 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 ALKAL1Q6UXT8 129 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 RTL10Q7L3V2 364 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 TMEM130Q8N3G9 435 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 ZNF461Q8TAF7 563 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 C18orf25Q96B23 403 aaPredicted RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 ELSPBP1Q96BH3 223 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 UROC1Q96N76 676 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 NELL2Q99435 816 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 CDT1Q9H211 546 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 EPC1Q9H2F5 836 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 BHMT2Q9H2M3 363 aa9.49□□□□□ -0.89
CLPX-205ENST00000559218 AVENQ9NQS1 362 aaPredicted RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 PRMT8Q9NR22 394 aaPredicted RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 RYDENQ9NUL5 291 aaKnown RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 NDRG2Q9UN36 371 aaKnown RBP9.49□□□□□ -0.89
CLPX-205ENST00000559218 PODXLO00592 558 aa9.48□□□□□ -0.89
CLPX-205ENST00000559218 LRG1P02750 347 aa9.48□□□□□ -0.89
CLPX-205ENST00000559218 OR52Z1P0C646 297 aa9.48□□□□□ -0.89
CLPX-205ENST00000559218 GRM5P41594 1212 aa9.48□□□□□ -0.89
CLPX-205ENST00000559218 MAGEA9P43362 315 aa9.48□□□□□ -0.89
CLPX-205ENST00000559218 NPTX2P47972 431 aa9.48□□□□□ -0.89
CLPX-205ENST00000559218 ANAPC15P60006 121 aa9.48□□□□□ -0.89
CLPX-205ENST00000559218 ADCY1Q08828 1119 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms