RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 STK25O00506 426 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 C8AP07357 584 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 HNRNPA1P09651 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
CASC4-205ENST00000558735 MAPTP10636 758 aaKnown RBP12.61□□□□□ -0.39
CASC4-205ENST00000558735 MCM2P49736 904 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 NTHL1P78549 312 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 UVSSAQ2YD98 709 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 SEZ6Q53EL9 994 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 AXDND1Q5T1B0 1012 aaPredicted RBP12.61□□□□□ -0.39
CASC4-205ENST00000558735 MPZL3Q6UWV2 235 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 ST13P5Q8NFI4 369 aaPredicted RBP12.61□□□□□ -0.39
CASC4-205ENST00000558735 LRRC15Q8TF66 581 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
CASC4-205ENST00000558735 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 RPP25Q9BUL9 199 aaKnown RBP12.61□□□□□ -0.39
CASC4-205ENST00000558735 HAPLN2Q9GZV7 340 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 TOPORSQ9NS56 1045 aaPredicted RBP12.61□□□□□ -0.39
CASC4-205ENST00000558735 MTRRQ9UBK8 725 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 BACE2Q9Y5Z0 518 aa12.61□□□□□ -0.39
CASC4-205ENST00000558735 TRIP11Q15643 1979 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 CCL16O15467 120 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 TRAPPC3O43617 180 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 TBC1D4O60343 1298 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 TOM1L1O75674 476 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 SDHBP21912 280 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 FSHRP23945 695 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 HOXA9P31269 272 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 SMTNP53814 917 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 STARD6P59095 220 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 STRN3Q13033 797 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 HTR4Q13639 388 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 PPM1LQ5SGD2 360 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 ANKS3Q6ZW76 656 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 GET4Q7L5D6 327 aaPredicted RBP12.6□□□□□ -0.39
CASC4-205ENST00000558735 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
CASC4-205ENST00000558735 GPR152Q8TDT2 470 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 C18orf25Q96B23 403 aaPredicted RBP12.6□□□□□ -0.39
CASC4-205ENST00000558735 ARHGEF3Q9NR81 526 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 SLC38A7Q9NVC3 462 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 KCND2Q9NZV8 630 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.6□□□□□ -0.39
CASC4-205ENST00000558735 CDY1Q9Y6F8 540 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
CASC4-205ENST00000558735 DOCK8Q8NF50 2099 aa12.6□□□□□ -0.39
CASC4-205ENST00000558735 PODXLO00592 558 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 CLDN3O15551 220 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 ABLIM3O94929 683 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 DCNP07585 359 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 HARSP12081 509 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 RPL9P32969 192 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 GRIN1Q05586 938 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 MCL1Q07820 350 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 MRPL58Q14197 206 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 LIN9Q5TKA1 542 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 ZPBP2Q6X784 338 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 RTL10Q7L3V2 364 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 TMEM130Q8N3G9 435 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 ZNF461Q8TAF7 563 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 ITFG1Q8TB96 612 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 SLC7A14Q8TBB6 771 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 CDK5RAP3Q96JB5 506 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 AK8Q96MA6 479 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 DDX23Q9BUQ8 820 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 UPF2Q9HAU5 1272 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 HCFC1R1Q9NWW0 138 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 DNMT3BQ9UBC3 853 aaKnown RBP12.59□□□□□ -0.39
CASC4-205ENST00000558735 FBXO4Q9UKT5 387 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 CDH7Q9ULB5 785 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 CA14Q9ULX7 337 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 POLIQ9UNA4 740 aa12.59□□□□□ -0.39
CASC4-205ENST00000558735 VWA8A3KMH1 1905 aa12.58□□□□□ -0.39
CASC4-205ENST00000558735 SPTLC1O15269 473 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 SLC26A4O43511 780 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 POU2F2P09086 479 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 GLULP15104 373 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 RFX1P22670 979 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 UBA7P41226 1012 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 NCKAP1LP55160 1127 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
CASC4-205ENST00000558735 ZBTB6Q15916 424 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 RSPO4Q2I0M5 234 aaPredicted RBP12.58□□□□□ -0.4
CASC4-205ENST00000558735 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
CASC4-205ENST00000558735 SLC8B1Q6J4K2 584 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 POTEHQ6S545 545 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 PARM1Q6UWI2 310 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 HAUS6Q7Z4H7 955 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 DCLK2Q8N568 766 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 FGF13Q92913 245 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 FGF14Q92915 247 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 KCNN1Q92952 543 aa12.58□□□□□ -0.4
CASC4-205ENST00000558735 SHDQ96IW2 340 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms