RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MYO10Q9HD67 2058 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 CCDC169A6NNP5 214 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 E9PMD0 336 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 K7ERI5 159 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 TGM5O43548 720 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 HIP1RO75146 1068 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 RFPL2O75678 378 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 PAPLNO95428 1278 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 PDGFBP01127 241 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-205ENST00000558700 HNRNPA1P09651 372 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAF3-205ENST00000558700 JUNDP17535 347 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 GUCY2CP25092 1073 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 GJB2P29033 226 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 AVPR2P30518 371 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 GRM5P41594 1212 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 NPTX2P47972 431 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 MRE11P49959 708 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 PEX3P56589 373 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 TDGQ13569 410 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 NAB2Q15742 525 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 GLRA4Q5JXX5 417 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 RTP2Q5QGT7 225 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 NT5DC1Q5TFE4 455 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 FAM171A1Q5VUB5 890 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 BLOC1S3Q6QNY0 202 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 PRSS55Q6UWB4 352 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-205ENST00000558700 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-205ENST00000558700 ALYREFQ86V81 257 aaKnown RBP8.84□□□□□ -0.99
TRAF3-205ENST00000558700 CEP57Q86XR8 500 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 PALB2Q86YC2 1186 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 FAM200AQ8TCP9 573 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 STK32AQ8WU08 396 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 RABGGTAQ92696 567 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 TMX3Q96JJ7 454 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 PAAF1Q9BRP4 392 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 RUSC1Q9BVN2 902 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 CDT1Q9H211 546 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 MFSD1Q9H3U5 465 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 KMT5AQ9NQR1 393 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 SLC38A7Q9NVC3 462 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 IGSF9Q9P2J2 1179 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 ARHGAP28Q9P2N2 729 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 CACNG4Q9UBN1 327 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 FBXW11Q9UKB1 542 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 DUSP12Q9UNI6 340 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 USP20Q9Y2K6 914 aa8.84□□□□□ -0.99
TRAF3-205ENST00000558700 RBM19Q9Y4C8 960 aaKnown RBP8.84□□□□□ -0.99
TRAF3-205ENST00000558700 VWA3AA6NCI4 1184 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 TRAPPC3O43617 180 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 XYLBO75191 536 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 BMP15O95972 392 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 F12P00748 615 aaPredicted RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 MCF2P10911 925 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 RPL17P18621 184 aaKnown RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 HOXA9P31269 272 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 STRN3Q13033 797 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 MAPK7Q13164 816 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 ZRSR1Q15695 479 aaKnown RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 HYIQ5T013 277 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 ARL6IP4Q66PJ3 421 aaKnown RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 RINT1Q6NUQ1 792 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 GET4Q7L5D6 327 aaPredicted RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 DAW1Q8N136 415 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 DEPDC4Q8N2C3 294 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 ZNF707Q96C28 371 aaPredicted RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 SNX27Q96L92 541 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 PPP1R10Q96QC0 940 aaKnown RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 MMTAG2Q9BU76 263 aaKnown RBP8.83□□□□□ -1
TRAF3-205ENST00000558700 PRKD2Q9BZL6 878 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 SMOC2Q9H3U7 446 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.83□□□□□ -1
TRAF3-205ENST00000558700 KCND2Q9NZV8 630 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 MAP10Q9P2G4 905 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 EPS15L1Q9UBC2 864 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 MTRRQ9UBK8 725 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 FBXL21Q9UKT6 434 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 SMC3Q9UQE7 1217 aa8.83□□□□□ -1
TRAF3-205ENST00000558700 MYH15Q9Y2K3 1946 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 GOLGA8CPA6NN73 597 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 H0YCG3 227 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 TK2O00142 265 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 SLC16A4O15374 487 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 SLC26A4O43511 780 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 N4BP1O75113 896 aaKnown RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 B3GAT3O94766 335 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 C8AP07357 584 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 POU2F2P09086 479 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 SPATA31D3P0C874 917 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 MYBP10242 640 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 HARSP12081 509 aaKnown RBP8.82□□□□□ -1
TRAF3-205ENST00000558700 PLS3P13797 630 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 FGFR3P22607 806 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 CDC25AP30304 524 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 SMTNP53814 917 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 TCF15Q12870 199 aa8.82□□□□□ -1
TRAF3-205ENST00000558700 NOLC1Q14978 699 aaKnown RBP eCLIP8.82□□□□□ -1
TRAF3-205ENST00000558700 IL17AQ16552 155 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms