RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ZNF667Q5HYK9 610 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 ZC3H18Q86VM9 953 aaKnown RBP16.41■□□□□ 0.22
AP4E1-202ENST00000558439 LRRC57Q8N9N7 239 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 KLF6Q99612 283 aaPredicted RBP16.41■□□□□ 0.22
AP4E1-202ENST00000558439 HEY1Q9Y5J3 304 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 MYH3P11055 1940 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 H0Y3Z8 333 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 MT-ND3P03897 115 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 TNFRSF8P28908 595 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 CXCL9Q07325 125 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 PPP6R3Q5H9R7 873 aaPredicted RBP16.41■□□□□ 0.22
AP4E1-202ENST00000558439 LLGL2Q6P1M3 1020 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 TRMT10CQ7L0Y3 403 aaKnown RBP16.41■□□□□ 0.22
AP4E1-202ENST00000558439 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.41■□□□□ 0.22
AP4E1-202ENST00000558439 PRELID2Q8N945 189 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 PARVAQ9NVD7 372 aa16.41■□□□□ 0.22
AP4E1-202ENST00000558439 CCT8L1PA6NM43 557 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 CES2O00748 559 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 SPIRE1Q08AE8 756 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 BMT2Q1RMZ1 405 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 WDR72Q3MJ13 1102 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 LRRC71Q8N4P6 559 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 CCDC110Q8TBZ0 833 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 N4BP2L2Q92802 583 aaPredicted RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 P2RX7Q99572 595 aaKnown RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 ECT2Q9H8V3 914 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 ETNK1Q9HBU6 452 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 FBXO40Q9UH90 709 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 IP6K2Q9UHH9 426 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 CNOT7Q9UIV1 285 aaKnown RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 A0A0G2JND7 137 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 F5H423 210 aaPredicted RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 I3L4J1 428 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 TULP2O00295 520 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 RARGP13631 454 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 P4HA1P13674 534 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 VCAM1P19320 739 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 GTF2H1P32780 548 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 PPATQ06203 517 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 SPARCL1Q14515 664 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 KCTD2Q14681 263 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 CYP4A22Q5TCH4 519 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 FOXR2Q6PJQ5 311 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 MYCBPQ99417 103 aaPredicted RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 C4AP0C0L4 1744 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 C4BP0C0L5 1744 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 HOXD13P35453 343 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 ORC1Q13415 861 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 PGM5Q15124 567 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 TTC17Q96AE7 1141 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 CFAP36Q96G28 342 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 ZBTB45Q96K62 511 aaPredicted RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 SH3GL2Q99962 352 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 TEX13BQ9BXU2 312 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 RPF1Q9H9Y2 349 aaKnown RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 WRAP73Q9P2S5 460 aaPredicted RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 MAGED2Q9UNF1 606 aaPredicted RBP16.4■□□□□ 0.22
AP4E1-202ENST00000558439 NEU2Q9Y3R4 380 aa16.4■□□□□ 0.22
AP4E1-202ENST00000558439 IGLV3-22A0A075B6J6 115 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 PIK3CDO00329 1044 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 SLC1A1P43005 524 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 STAT5BP51692 787 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 MYO1EQ12965 1108 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 TRPM8Q7Z2W7 1104 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 MREGQ8N565 214 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 PWWP2AQ96N64 755 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 CYP26B1Q9NR63 512 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 COG5Q9UP83 839 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 CDH16O75309 829 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 TBXAS1P24557 533 aaPredicted RBP16.39■□□□□ 0.21
AP4E1-202ENST00000558439 RASSF2P50749 326 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 CAV1Q03135 178 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 CYP24A1Q07973 514 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 UGCGQ16739 394 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 ZNF772Q68DY9 489 aaPredicted RBP16.39■□□□□ 0.21
AP4E1-202ENST00000558439 C4orf19Q8IY42 314 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 SCYL3Q8IZE3 742 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 ZNF280CQ8ND82 737 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 KCNV2Q8TDN2 545 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 PSPC1Q8WXF1 523 aaKnown RBP16.39■□□□□ 0.21
AP4E1-202ENST00000558439 TIPINQ9BVW5 301 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 DNAI2Q9GZS0 605 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 RANBP17Q9H2T7 1088 aaKnown RBP16.39■□□□□ 0.21
AP4E1-202ENST00000558439 SIX2Q9NPC8 291 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 TTLL3Q9Y4R7 772 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 ROBO1Q9Y6N7 1651 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 WNT10BO00744 389 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 MYBL1P10243 752 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 NEDD9Q14511 834 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 LGSNQ5TDP6 509 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 SPATA21Q7Z572 469 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 SIAH1Q8IUQ4 282 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 SPIRE2Q8WWL2 714 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 SEPT10Q9P0V9 454 aa16.39■□□□□ 0.21
AP4E1-202ENST00000558439 HESX1Q9UBX0 185 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms