RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 ZHX3Q9H4I2 956 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 KIAA1586Q9HCI6 787 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 TAS2R1Q9NYW7 299 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 KANSL3Q9P2N6 904 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 STX8Q9UNK0 236 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 WASF2Q9Y6W5 498 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 SPOPO43791 374 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 CYP19A1P11511 503 aaPredicted RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 CA4P22748 312 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 GCAP28676 217 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 ADCY8P40145 1251 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 BPIFB4P59827 614 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 PLEKHG4Q58EX7 1191 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 C6orf163Q5TEZ5 329 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 SUSD4Q5VX71 490 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 RINLQ6ZS11 566 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 ANKS1BQ7Z6G8 1248 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 SFR1Q86XK3 245 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 FAM186BQ8IYM0 893 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 ALDH16A1Q8IZ83 802 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 PSPC1Q8WXF1 523 aaKnown RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 INTS2Q9H0H0 1204 aaKnown RBP11.89□□□□□ -0.51
PCAT29-201ENST00000558411 ZNF287Q9HBT7 754 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 NDE1Q9NXR1 346 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 HSFX1Q9UBD0 423 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 SSX2IPQ9Y2D8 614 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 NUMBLQ9Y6R0 609 aa11.89□□□□□ -0.51
PCAT29-201ENST00000558411 NAV1Q8NEY1 1877 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 RAD21O60216 631 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 TGDSO95455 350 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 ESRRAP11474 423 aaPredicted RBP11.88□□□□□ -0.51
PCAT29-201ENST00000558411 GZMAP12544 262 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 PGM1P36871 562 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 MAGEA4P43358 317 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 HPCAP84074 193 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 XIAPP98170 497 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 CDK16Q00536 496 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 CENPCQ03188 943 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 DEUP1Q05D60 604 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 CDC16Q13042 620 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 SLC1A5Q15758 541 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
PCAT29-201ENST00000558411 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 NOP9Q86U38 636 aaKnown RBP11.88□□□□□ -0.51
PCAT29-201ENST00000558411 ZCCHC9Q8N567 271 aaKnown RBP11.88□□□□□ -0.51
PCAT29-201ENST00000558411 C1orf54Q8WWF1 131 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
PCAT29-201ENST00000558411 FAM84BQ96KN1 310 aaPredicted RBP11.88□□□□□ -0.51
PCAT29-201ENST00000558411 POLR3CQ9BUI4 534 aaPredicted RBP11.88□□□□□ -0.51
PCAT29-201ENST00000558411 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 ETNK2Q9NVF9 386 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 HEY2Q9UBP5 337 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 NEU2Q9Y3R4 380 aa11.88□□□□□ -0.51
PCAT29-201ENST00000558411 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 HNRNPRO43390 633 aaKnown RBP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 TOM1O60784 492 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 RNASEH1O60930 286 aaKnown RBP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CYP1A2P05177 515 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 SPATA31D3P0C874 917 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 BCRP11274 1271 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 IL6STP40189 918 aaPredicted RBP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 Q4G0T1 1027 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 TMCO4Q5TGY1 634 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 SPATA31D4Q6ZUB0 917 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CCDC89Q8N998 374 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CCDC110Q8TBZ0 833 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 DYNLL2Q96FJ2 89 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 PHACTR1Q9C0D0 580 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 DNAJC17Q9NVM6 304 aaKnown RBP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 UVRAGQ9P2Y5 699 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 SLC24A2Q9UI40 661 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 MTMR7Q9Y216 660 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 MYO3BQ8WXR4 1341 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 GSTTP1A0A1W2PQM5 241 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CLDN3O15551 220 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 AP1G1O43747 822 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 FKBP6O75344 327 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CIB2O75838 187 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 IL2RBP14784 551 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 ETS2P15036 469 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 KRT15P19012 456 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 AMPD1P23109 780 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CCNFP41002 786 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 TNNI2P48788 182 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 CLCN2P51788 898 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 ARFIP2P53365 341 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 ACTR3P61158 418 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 PPP2R5CQ13362 524 aa11.87□□□□□ -0.51
PCAT29-201ENST00000558411 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms