RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 RSPH1Q8WYR4 309 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 CLP1Q92989 425 aaKnown RBP16.53■□□□□ 0.24
NEDD1-213ENST00000557644 C17orf80Q9BSJ5 609 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 SLC38A7Q9NVC3 462 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 PRG3Q9Y2Y8 225 aaPredicted RBP16.53■□□□□ 0.24
NEDD1-213ENST00000557644 TDRD15B5MCY1 1934 aaKnown RBP16.53■□□□□ 0.24
NEDD1-213ENST00000557644 PPEF2O14830 753 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 GNA14O95837 355 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 GALTP07902 379 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 OR1G1P47890 313 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 CLDN10P78369 228 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 SMAD3P84022 425 aaKnown RBP16.53■□□□□ 0.24
NEDD1-213ENST00000557644 TAP1Q03518 808 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 RAB30Q15771 203 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 C1orf127Q8N9H9 656 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 DPP3Q9NY33 737 aa16.53■□□□□ 0.24
NEDD1-213ENST00000557644 TMEM191BP0C7N4 346 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 GCLMP48507 274 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 MARSP56192 900 aaKnown RBP16.52■□□□□ 0.24
NEDD1-213ENST00000557644 DUOXA2Q1HG44 320 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 CDKAL1Q5VV42 579 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 BEST2Q8NFU1 509 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 HASPINQ8TF76 798 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 SLC35C1Q96A29 364 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 CERS4Q9HA82 394 aa16.52■□□□□ 0.24
NEDD1-213ENST00000557644 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
NEDD1-213ENST00000557644 SOX1O00570 391 aaPredicted RBP16.52■□□□□ 0.23
NEDD1-213ENST00000557644 NRP1O14786 923 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 IKBKBO14920 756 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 ITGB1P05556 798 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 UPP1Q16831 310 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 KCNT2Q6UVM3 1135 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 NT5DC4Q86YG4 428 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 COLGALT1Q8NBJ5 622 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 C3orf58Q8NDZ4 430 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 FAM200AQ8TCP9 573 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 TIFAQ96CG3 184 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 ANKRD36BP1Q96IX9 119 aa16.52■□□□□ 0.23
NEDD1-213ENST00000557644 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.23
NEDD1-213ENST00000557644 BECN2A8MW95 431 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 KCNJ18B7U540 433 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 ALDH2P05091 517 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 ITGB3P05106 788 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 ALDH7A1P49419 539 aaKnown RBP16.51■□□□□ 0.23
NEDD1-213ENST00000557644 MCCD1P59942 119 aaPredicted RBP16.51■□□□□ 0.23
NEDD1-213ENST00000557644 KCNJ12Q14500 433 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 TDRD10Q5VZ19 366 aaKnown RBP16.51■□□□□ 0.23
NEDD1-213ENST00000557644 PPP2R2DQ66LE6 453 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 SV2AQ7L0J3 742 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 TRAPPC11Q7Z392 1133 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 CXorf38Q8TB03 319 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 CACTINQ8WUQ7 758 aaKnown RBP16.51■□□□□ 0.23
NEDD1-213ENST00000557644 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
NEDD1-213ENST00000557644 TSPAN18Q96SJ8 248 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 SIX4Q9UIU6 781 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 PODXLO00592 558 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 TNNC2P02585 160 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 C4BPAP04003 597 aaKnown RBP16.51■□□□□ 0.23
NEDD1-213ENST00000557644 ATP1A3P13637 1013 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 CYP3A5P20815 502 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 CBWD6Q4V339 395 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 TCP11X2Q5H9J9 407 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 CBWD3Q5JTY5 395 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 CBWD5Q5RIA9 395 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 ZNF558Q96NG5 402 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 SLC28A3Q9HAS3 691 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 MAGEC2Q9UBF1 373 aaPredicted RBP16.51■□□□□ 0.23
NEDD1-213ENST00000557644 FAN1Q9Y2M0 1017 aa16.51■□□□□ 0.23
NEDD1-213ENST00000557644 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 XPOTO43592 962 aaKnown RBP16.5■□□□□ 0.23
NEDD1-213ENST00000557644 B3GAT3O94766 335 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 KIF4AO95239 1232 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 CAVIN2O95810 425 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 CST3P01034 146 aaPredicted RBP16.5■□□□□ 0.23
NEDD1-213ENST00000557644 KRT19P08727 400 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 ZNF18P17022 549 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 LAG3P18627 525 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 LRPAP1P30533 357 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 POLR2BP30876 1174 aaKnown RBP16.5■□□□□ 0.23
NEDD1-213ENST00000557644 CTNNB1P35222 781 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 MTIF2P46199 727 aaKnown RBP16.5■□□□□ 0.23
NEDD1-213ENST00000557644 C9orf57Q5W0N0 161 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 USP37Q86T82 979 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 GAS2L3Q86XJ1 694 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 FAM114A1Q8IWE2 563 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 ELMO3Q96BJ8 720 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 TMEM175Q9BSA9 504 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 MARCH5Q9NX47 278 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
NEDD1-213ENST00000557644 BMPR1AP36894 532 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 BIRC3Q13489 604 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 EPC2Q52LR7 807 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 CD300LGQ6UXG3 332 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 LRCH3Q96II8 777 aa16.5■□□□□ 0.23
NEDD1-213ENST00000557644 ANO9A1A5B4 782 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 LRRN2O75325 713 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 ENPEPQ07075 957 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 KCNH2Q12809 1159 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms