RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 FERMT2Q96AC1 680 aa4.27□□□□□ -1.73
FOXN3-217ENST00000557572 PKNOX2Q96KN3 472 aa4.27□□□□□ -1.73
FOXN3-217ENST00000557572 NAP1L5Q96NT1 182 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-217ENST00000557572 MYL10Q9BUA6 226 aa4.27□□□□□ -1.73
FOXN3-217ENST00000557572 UNKLQ9H9P5 680 aaKnown RBP4.27□□□□□ -1.73
FOXN3-217ENST00000557572 TYW1Q9NV66 732 aaKnown RBP4.27□□□□□ -1.73
FOXN3-217ENST00000557572 FANCLQ9NW38 375 aa4.27□□□□□ -1.73
FOXN3-217ENST00000557572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.27□□□□□ -1.73
FOXN3-217ENST00000557572 PRKAB1Q9Y478 270 aa4.27□□□□□ -1.73
FOXN3-217ENST00000557572 EID1Q9Y6B2 187 aa4.27□□□□□ -1.73
FOXN3-217ENST00000557572 ZMYM3Q14202 1370 aa4.27□□□□□ -1.73
FOXN3-217ENST00000557572 DRGXA6NNA5 263 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 HMGB1P1B2RPK0 211 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-217ENST00000557572 PEX1O43933 1283 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 MASP1P48740 699 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 UNQ6494/PRO21346Q6UXR6 183 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 FAM43BQ6ZT52 329 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-217ENST00000557572 LILRB2Q8N423 598 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 ZFP28Q8NHY6 868 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 PNISRQ8TF01 805 aaKnown RBP4.26□□□□□ -1.73
FOXN3-217ENST00000557572 RSAD2Q8WXG1 361 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 HMCESQ96FZ2 354 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 DEPDC7Q96QD5 511 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 SRPK1Q96SB4 655 aaKnown RBP4.26□□□□□ -1.73
FOXN3-217ENST00000557572 ELF4Q99607 663 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-217ENST00000557572 ZSWIM1Q9BR11 485 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 FAM126AQ9BYI3 521 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-217ENST00000557572 WNT8AQ9H1J5 351 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 GALNT9Q9HCQ5 603 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 CHST12Q9NRB3 414 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 SNTG2Q9NY99 539 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 TCEAL9Q9UHQ7 104 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
FOXN3-217ENST00000557572 LINC01548A6NM66 108 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 CBX4O00257 560 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 PFKMP08237 780 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 PTMSP20962 102 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 BDNFP23560 247 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 GNALP38405 381 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 TMEM119Q4V9L6 283 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 C19orf54Q5BKX5 351 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 GPR158Q5T848 1215 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 ZNF782Q6ZMW2 699 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-217ENST00000557572 KIF18BQ86Y91 864 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 RHOT2Q8IXI1 618 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 MSL3Q8N5Y2 521 aaKnown RBP4.25□□□□□ -1.73
FOXN3-217ENST00000557572 BOD1Q96IK1 185 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 TMEM74BQ9NUR3 256 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 KLHL11Q9NVR0 708 aa4.25□□□□□ -1.73
FOXN3-217ENST00000557572 CDC45O75419 566 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 LDHAP00338 332 aaKnown RBP4.24□□□□□ -1.73
FOXN3-217ENST00000557572 GASTP01350 101 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 CD1AP06126 327 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 CD40P25942 277 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 EPHB2P29323 1055 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 NR4A2P43354 598 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 CDKN1CP49918 316 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-217ENST00000557572 NRG3P56975 720 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 CXADRP78310 365 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 FHL3Q13643 280 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 DHX8Q14562 1220 aaKnown RBP4.24□□□□□ -1.73
FOXN3-217ENST00000557572 C2orf27AQ580R0 203 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 KIAA0907Q7Z7F0 614 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-217ENST00000557572 NEK8Q86SG6 692 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 PRPF38AQ8NAV1 312 aaKnown RBP4.24□□□□□ -1.73
FOXN3-217ENST00000557572 SH3TC2Q8TF17 1288 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 CDC5LQ99459 802 aaKnown RBP4.24□□□□□ -1.73
FOXN3-217ENST00000557572 FDXACB1Q9BRP7 624 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-217ENST00000557572 POFUT1Q9H488 388 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 ZMAT4Q9H898 229 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 COMMD10Q9Y6G5 202 aa4.24□□□□□ -1.73
FOXN3-217ENST00000557572 MYMKA6NI61 221 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 CCDC85CA6NKD9 419 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 PJA2O43164 708 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 SLC9A1P19634 815 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 SOX10P56693 466 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 LAMB3Q13751 1172 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 LRRC41Q15345 812 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 TKFCQ3LXA3 575 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 BRDTQ58F21 947 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-217ENST00000557572 ZNF628Q5EBL2 1059 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 SYCP2LQ5T4T6 812 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 YTHDF3Q7Z739 585 aaKnown RBP4.23□□□□□ -1.73
FOXN3-217ENST00000557572 THNSL2Q86YJ6 484 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 WDR75Q8IWA0 830 aaKnown RBP4.23□□□□□ -1.73
FOXN3-217ENST00000557572 FAM43AQ8N2R8 423 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 SENP7Q9BQF6 1050 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 SPRTNQ9H040 489 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-217ENST00000557572 HOMER2Q9NSB8 354 aa4.23□□□□□ -1.73
FOXN3-217ENST00000557572 FBXO9Q9UK97 447 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-217ENST00000557572 ELL2O00472 640 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-217ENST00000557572 FGAP02671 866 aa4.22□□□□□ -1.73
FOXN3-217ENST00000557572 LTA4HP09960 611 aaKnown RBP4.22□□□□□ -1.73
FOXN3-217ENST00000557572 XPAP23025 273 aaPredicted RBP4.22□□□□□ -1.73
FOXN3-217ENST00000557572 MPGP29372 298 aa4.22□□□□□ -1.73
FOXN3-217ENST00000557572 FLT3P36888 993 aa4.22□□□□□ -1.73
FOXN3-217ENST00000557572 FOLR3P41439 243 aa4.22□□□□□ -1.73
FOXN3-217ENST00000557572 ESPNLQ6ZVH7 1005 aa4.22□□□□□ -1.73
FOXN3-217ENST00000557572 GLB1L2Q8IW92 636 aa4.22□□□□□ -1.73
FOXN3-217ENST00000557572 KRT78Q8N1N4 520 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms