RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CUL4BQ13620 913 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 CLUL1Q15846 466 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 ZBTB41Q5SVQ8 909 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 PPFIBP1Q86W92 1011 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 GRAMD1CQ8IYS0 662 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 RNF168Q8IYW5 571 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-214ENST00000557490 VN1R2Q8NFZ6 395 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 CASP10Q92851 521 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 HPS3Q969F9 1004 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 FGFBP2Q9BYJ0 223 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 GPR62Q9BZJ7 368 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 GOLGA2P5Q9HBQ8 144 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 CLEC1BQ9P126 229 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 BARX2Q9UMQ3 279 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-214ENST00000557490 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.35
TUBB3-214ENST00000557490 ATG2AQ2TAZ0 1938 aa17.27■□□□□ 0.35
TUBB3-214ENST00000557490 PLXNA3P51805 1871 aa17.27■□□□□ 0.35
TUBB3-214ENST00000557490 TTC26A0AVF1 554 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 LACTBL1A8MY62 500 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 TMEM189-UBE2V1I3L0A0 370 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 MEFVO15553 781 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 XPOTO43592 962 aaKnown RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 FAM189A1O60320 539 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 LILRB3O75022 631 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 KLRC2P26717 231 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 CASP1P29466 404 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 RPL9P32969 192 aaKnown RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 CLCNKBP51801 687 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 SOX4Q06945 474 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 ENOX2Q16206 610 aaKnown RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 UPP1Q16831 310 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 TMEM184AQ6ZMB5 413 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 CD302Q8IX05 232 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 GPR65Q8IYL9 337 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 C18orf25Q96B23 403 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 FAM212AQ96EL1 285 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 TSPAN18Q96SJ8 248 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 IKZF4Q9H2S9 585 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
TUBB3-214ENST00000557490 CPSF3Q9UKF6 684 aaKnown RBP17.26■□□□□ 0.35
TUBB3-214ENST00000557490 PODXLO00592 558 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
TUBB3-214ENST00000557490 TRAPPC3O43617 180 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 MYL1P05976 194 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 CNPP09543 421 aaKnown RBP17.25■□□□□ 0.35
TUBB3-214ENST00000557490 GARTP22102 1010 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 ADSSP30520 456 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 ACOT2P49753 483 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 CREMQ03060 361 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 SPAG1Q07617 926 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 SMAD4Q13485 552 aaKnown RBP17.25■□□□□ 0.35
TUBB3-214ENST00000557490 KCNC3Q14003 757 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 FAM171A1Q5VUB5 890 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 RIN2Q8WYP3 895 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-214ENST00000557490 EDAQ92838 391 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 MSLNLQ96KJ4 702 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 B3GALT6Q96L58 329 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 TTPALQ9BTX7 342 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.25■□□□□ 0.35
TUBB3-214ENST00000557490 UBQLN1Q9UMX0 589 aaKnown RBP17.25■□□□□ 0.35
TUBB3-214ENST00000557490 HCFC2Q9Y5Z7 792 aa17.25■□□□□ 0.35
TUBB3-214ENST00000557490 ADH1AP07327 375 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 HOXB8P17481 243 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-214ENST00000557490 POU5F1Q01860 360 aaKnown RBP17.24■□□□□ 0.35
TUBB3-214ENST00000557490 ANKRD54Q6NXT1 300 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 CEP57Q86XR8 500 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 RNF135Q8IUD6 432 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 GLIS3Q8NEA6 775 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
TUBB3-214ENST00000557490 PBXIP1Q96AQ6 731 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 CCDC34Q96HJ3 373 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 GOLPH3LQ9H4A5 285 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 RXFP1Q9HBX9 757 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 EXOC1Q9NV70 894 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 TUBGCP4Q9UGJ1 667 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 VPS13AQ96RL7 3174 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 CACNA1GO43497 2377 aa17.24■□□□□ 0.35
TUBB3-214ENST00000557490 UBE4BO95155 1302 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 MBTPS2O43462 519 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 ZNF202O95125 648 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 LDHAP00338 332 aaKnown RBP17.23■□□□□ 0.35
TUBB3-214ENST00000557490 ADRB2P07550 413 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 CYP3A5P20815 502 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 EHHADHQ08426 723 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 ARMCX5Q6P1M9 558 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 PDXDC1Q6P996 788 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-214ENST00000557490 KRBA2Q6ZNG9 492 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 EPM2AIP1Q7L775 607 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-214ENST00000557490 ERMP1Q7Z2K6 904 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 BEST2Q8NFU1 509 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 ZNF507Q8TCN5 953 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 SLC22A17Q8WUG5 538 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 FAM213AQ9BRX8 229 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms