RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PARP14Q460N5 1801 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 TECTAO75443 2155 aa5.59□□□□□ -1.52
ATXN3-247ENST00000557311 TET1Q8NFU7 2136 aa5.59□□□□□ -1.52
ATXN3-247ENST00000557311 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 ZFHX2Q9C0A1 2572 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 UPK3BL1B0FP48 263 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 UPK3BL2E5RIL1 263 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 NOP56O00567 594 aaKnown RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 EOMESO95936 686 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 PDGFBP01127 241 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 PRNPP04156 253 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 LGALS2P05162 132 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 STAG3L1P0CL83 205 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 MYCLP12524 364 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 HOXB8P17481 243 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 SSR1P43307 286 aaKnown RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 CLCN5P51795 746 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 SP2Q02086 613 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 PRKCQQ04759 706 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 UBE3AQ05086 875 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 SLC20A2Q08357 652 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 FZD5Q13467 585 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 MPP2Q14168 576 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 CDC37Q16543 378 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 RRP12Q5JTH9 1297 aaKnown RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 TAF2Q6P1X5 1199 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 TMEM184AQ6ZMB5 413 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 STOX1Q6ZVD7 989 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 RSPH3Q86UC2 560 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 DGKHQ86XP1 1220 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 EXOC8Q8IYI6 725 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 CMTR2Q8IYT2 770 aaKnown RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 MFSD4AQ8N468 514 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 SAMD3Q8N6K7 520 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 TMEM105Q8N8V8 129 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 KREMEN2Q8NCW0 462 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 RIN3Q8TB24 985 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 PDCD2LQ9BRP1 358 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 BACH2Q9BYV9 841 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 S1PR5Q9H228 398 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 GEMIN8Q9NWZ8 242 aaKnown RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 ADAM30Q9UKF2 790 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 VAV3Q9UKW4 847 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 MAPK8IP1Q9UQF2 711 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 MRPL42Q9Y6G3 142 aaKnown RBP5.58□□□□□ -1.52
ATXN3-247ENST00000557311 U3KQE9 123 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 SCN5AQ14524 2016 aa5.58□□□□□ -1.52
ATXN3-247ENST00000557311 NRCAMQ92823 1304 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 FAM221AA4D161 298 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 CCER2I3L3R5 266 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 PER2O15055 1255 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 FOXP2O15409 715 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 GLP2RO95838 553 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 CFBP00751 764 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 FGAP02671 866 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 GOLGA8HP0CJ92 632 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 GHRP10912 638 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 PCP11498 1178 aaKnown RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 UBA1P22314 1058 aaKnown RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 GBP1P32455 592 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 ETV3P41162 512 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 HSD17B4P51659 736 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 ADAM17P78536 824 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 GHRHRQ02643 423 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 APOBRQ0VD83 1088 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 NEDD9Q14511 834 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 LPIN1Q14693 890 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 DUSP6Q16828 381 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 SEZ6Q53EL9 994 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 CCDC178Q5BJE1 867 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 ANKRD54Q6NXT1 300 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 FBXL19Q6PCT2 694 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 DGLUCYQ7Z3D6 616 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 MCATQ8IVS2 390 aaKnown RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 MRPL41Q8IXM3 137 aaKnown RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 ADGRF4Q8IZF3 695 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 TMTC2Q8N394 836 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 PI4K2BQ8TCG2 481 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 ASB11Q8WXH4 323 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 ACSF2Q96CM8 615 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 FTHL17Q9BXU8 183 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 GTPBP4Q9BZE4 634 aaKnown RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 CPVLQ9H3G5 476 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 SEMA4AQ9H3S1 761 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 DCTPP1Q9H773 170 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 VAT1LQ9HCJ6 419 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 REV1Q9UBZ9 1251 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 ZNF215Q9UL58 517 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-247ENST00000557311 SORCS3Q9UPU3 1222 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 SH3BP1Q9Y3L3 701 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 PCDHB12Q9Y5F1 795 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
ATXN3-247ENST00000557311 MCM3APO60318 1980 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 COL4A6Q14031 1691 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 GREB1LQ9C091 1923 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms