RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PIGRP01833 764 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 ACOT2P49753 483 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 ARPP19P56211 112 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 ZXDAP98168 799 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 ENOX2Q16206 610 aaKnown RBP18.02■□□□□ 0.48
VSX1-207ENST00000557285 PTPN21Q16825 1174 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 LIN9Q5TKA1 542 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 ADALQ6DHV7 355 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 PDXDC1Q6P996 788 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 LILRA6Q6PI73 481 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 C15orf39Q6ZRI6 1047 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 PLEKHA4Q9H4M7 779 aa18.02■□□□□ 0.48
VSX1-207ENST00000557285 MORC2Q9Y6X9 1032 aaPredicted RBP18.02■□□□□ 0.48
VSX1-207ENST00000557285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.01■□□□□ 0.47
VSX1-207ENST00000557285 TTC26A0AVF1 554 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 CUTAO60888 179 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 PPP6R2O75170 966 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 GAP43P17677 238 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 SCP2P22307 547 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 RPL9P32969 192 aaKnown RBP18.01■□□□□ 0.47
VSX1-207ENST00000557285 ME1P48163 572 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 KCNA1Q09470 495 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 VARS2Q5ST30 1063 aaKnown RBP18.01■□□□□ 0.47
VSX1-207ENST00000557285 RSPO2Q6UXX9 243 aaPredicted RBP18.01■□□□□ 0.47
VSX1-207ENST00000557285 HFE2Q6ZVN8 426 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 ZNF720Q7Z2F6 126 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 GPR65Q8IYL9 337 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 CMASQ8NFW8 434 aaPredicted RBP18.01■□□□□ 0.47
VSX1-207ENST00000557285 ACSF2Q96CM8 615 aaPredicted RBP18.01■□□□□ 0.47
VSX1-207ENST00000557285 SMOC2Q9H3U7 446 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 PLEKHA5Q9HAU0 1116 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 PANK4Q9NVE7 773 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 MTRRQ9UBK8 725 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 FBXW11Q9UKB1 542 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 POLIQ9UNA4 740 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 HCN4Q9Y3Q4 1203 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 TECTAO75443 2155 aa18.01■□□□□ 0.47
VSX1-207ENST00000557285 CLUHO75153 1309 aa18■□□□□ 0.47
VSX1-207ENST00000557285 DOCK6Q96HP0 2047 aa18■□□□□ 0.47
VSX1-207ENST00000557285 TMEM221A6NGB7 291 aa18■□□□□ 0.47
VSX1-207ENST00000557285 M0R296 226 aa18■□□□□ 0.47
VSX1-207ENST00000557285 FAM189A1O60320 539 aa18■□□□□ 0.47
VSX1-207ENST00000557285 C8AP07357 584 aa18■□□□□ 0.47
VSX1-207ENST00000557285 GBP2P32456 591 aaPredicted RBP18■□□□□ 0.47
VSX1-207ENST00000557285 ABCD1P33897 745 aa18■□□□□ 0.47
VSX1-207ENST00000557285 CASP5P51878 434 aa18■□□□□ 0.47
VSX1-207ENST00000557285 DNM1Q05193 864 aaKnown RBP18■□□□□ 0.47
VSX1-207ENST00000557285 KYAT1Q16773 422 aa18■□□□□ 0.47
VSX1-207ENST00000557285 PPM1LQ5SGD2 360 aa18■□□□□ 0.47
VSX1-207ENST00000557285 JADE1Q6IE81 842 aa18■□□□□ 0.47
VSX1-207ENST00000557285 SHC4Q6S5L8 630 aa18■□□□□ 0.47
VSX1-207ENST00000557285 TRIM67Q6ZTA4 783 aa18■□□□□ 0.47
VSX1-207ENST00000557285 ANKS3Q6ZW76 656 aa18■□□□□ 0.47
VSX1-207ENST00000557285 SLC7A14Q8TBB6 771 aa18■□□□□ 0.47
VSX1-207ENST00000557285 NOC3LQ8WTT2 800 aaKnown RBP18■□□□□ 0.47
VSX1-207ENST00000557285 POMGNT1Q8WZA1 660 aa18■□□□□ 0.47
VSX1-207ENST00000557285 ZNF707Q96C28 371 aaPredicted RBP18■□□□□ 0.47
VSX1-207ENST00000557285 FGFBP2Q9BYJ0 223 aa18■□□□□ 0.47
VSX1-207ENST00000557285 SEL1LQ9UBV2 794 aa18■□□□□ 0.47
VSX1-207ENST00000557285 AGO2Q9UKV8 859 aaKnown RBP18■□□□□ 0.47
VSX1-207ENST00000557285 ANK1P16157 1881 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 CCL16O15467 120 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 ZMYND10O75800 440 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 NFICP08651 508 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 AXDND1Q5T1B0 1012 aaPredicted RBP17.99■□□□□ 0.47
VSX1-207ENST00000557285 GET4Q7L5D6 327 aaPredicted RBP17.99■□□□□ 0.47
VSX1-207ENST00000557285 OTOP3Q7RTS5 596 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 SYCP3Q8IZU3 236 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 KCNG4Q8TDN1 519 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 HDAC7Q8WUI4 952 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 KCNN1Q92952 543 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 HPS3Q969F9 1004 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 ACCSQ96QU6 501 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 PRKD2Q9BZL6 878 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 ST6GALNAC4Q9H4F1 302 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 ZDHHC7Q9NXF8 308 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 CPSF3Q9UKF6 684 aaKnown RBP17.99■□□□□ 0.47
VSX1-207ENST00000557285 UBQLN1Q9UMX0 589 aaKnown RBP17.99■□□□□ 0.47
VSX1-207ENST00000557285 USTQ9Y2C2 406 aa17.99■□□□□ 0.47
VSX1-207ENST00000557285 PDIA4P13667 645 aaKnown RBP17.98■□□□□ 0.47
VSX1-207ENST00000557285 ASIC1P78348 528 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 NTHL1P78549 312 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 MTMR3Q13615 1198 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 RAB33AQ14088 237 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 CTXN3Q4LDR2 81 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
VSX1-207ENST00000557285 SLFN12LQ6IEE8 588 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 GRASPQ7Z6J2 395 aaPredicted RBP17.98■□□□□ 0.47
VSX1-207ENST00000557285 CCDC65Q8IXS2 484 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 ZDHHC14Q8IZN3 488 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 PLCD3Q8N3E9 789 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 ST13P5Q8NFI4 369 aaPredicted RBP17.98■□□□□ 0.47
VSX1-207ENST00000557285 PBXIP1Q96AQ6 731 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 SAAL1Q96ER3 474 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 WDR6Q9NNW5 1121 aaKnown RBP17.98■□□□□ 0.47
VSX1-207ENST00000557285 PCDHA7Q9UN72 937 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 EXOC7Q9UPT5 735 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 TIMM13Q9Y5L4 95 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms