RNA–Protein interactions for RNA: ENST00000557143.1

KLC1-222, Transcript of kinesin light chain 1, human

TSL 2

Gene KLC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-222	ENST00000557143	BRD1	O95696	1058 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	SP100	P23497	879 aa	Predicted RBP	13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	KLRC2	P26717	231 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	STAT6	P42226	847 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	BRCC3	P46736	316 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	GUCY2F	P51841	1108 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	GTF2B	Q00403	316 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	MCL1	Q07820	350 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	PUS10	Q3MIT2	529 aa	Known RBP	13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	RARS2	Q5T160	578 aa	Known RBP	13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	PALB2	Q86YC2	1186 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	RIN2	Q8WYP3	895 aa	Predicted RBP	13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	SUSD6	Q92537	303 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	DHX58	Q96C10	678 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	BICD1	Q96G01	975 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	SNX27	Q96L92	541 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	ACAP3	Q96P50	834 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	CCDC94	Q9BW85	323 aa	Predicted RBP	13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	STRA6	Q9BX79	667 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	MRPL17	Q9NRX2	175 aa	Known RBP	13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	RCOR1	Q9UKL0	485 aa		13.18	□□□□□ -0.3
KLC1-222	ENST00000557143	LACTBL1	A8MY62	500 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	CLDN3	O15551	220 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	CXCL8	P10145	99 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	IDE	P14735	1019 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	MATR3	P43243	847 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	GLUD2	P49448	558 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	CLCN4	P51793	760 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	DSG1	Q02413	1049 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	FAM171A1	Q5VUB5	890 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	TMC5	Q6UXY8	1006 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	ZPBP2	Q6X784	338 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	CCDC73	Q6ZRK6	1079 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	ZNF720	Q7Z2F6	126 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	CEP57	Q86XR8	500 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	ADHFE1	Q8IWW8	467 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	GRAMD1C	Q8IYS0	662 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	WNT2B	Q93097	391 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143	TUBGCP4	Q9UGJ1	667 aa		13.17	□□□□□ -0.3
KLC1-222	ENST00000557143		A0A0B4J269	797 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	RNF40	O75150	1001 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	NR1I2	O75469	434 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	PIGR	P01833	764 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	UROD	P06132	367 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	KCNE1	P15382	129 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	ADSS	P30520	456 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	TXLNA	P40222	546 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	GCGR	P47871	477 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	ME1	P48163	572 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	LIG4	P49917	911 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	YARS	P54577	528 aa	Known RBP	13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	ENOX2	Q16206	610 aa	Known RBP	13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	UPP1	Q16831	310 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	USP41	Q3LFD5	358 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	SCARA3	Q6AZY7	606 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	KIAA1841	Q6NSI8	718 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	MAP4K3	Q8IVH8	894 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	TMEM87A	Q8NBN3	555 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	LNX1	Q8TBB1	728 aa	Predicted RBP	13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	CASP10	Q92851	521 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	FAM84A	Q96KN4	292 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	RPGRIP1	Q96KN7	1286 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	FBXL18	Q96ME1	805 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	RXFP1	Q9HBX9	757 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	CNTN3	Q9P232	1028 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	ZMYM2	Q9UBW7	1377 aa		13.16	□□□□□ -0.3
KLC1-222	ENST00000557143	TTC26	A0AVF1	554 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	FAM86C2P	A6NEL3	165 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	PPEF2	O14830	753 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	HNRNPDL	O14979	420 aa	Known RBP	13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	POLR2D	O15514	142 aa	Known RBP	13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	RFPL2	O75678	378 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	B3GAT3	O94766	335 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	TKT	P29401	623 aa	Known RBP	13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	ACOT2	P49753	483 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	WNT7B	P56706	349 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	RESP18	Q5W5W9	173 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	DCLRE1A	Q6PJP8	1040 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	KCNN1	Q92952	543 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	CLSTN3	Q9BQT9	956 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	MSTO1	Q9BUK6	570 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	EMILIN2	Q9BXX0	1053 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	BLZF1	Q9H2G9	400 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	ADAM7	Q9H2U9	754 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	POMK	Q9H5K3	350 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	MRPL44	Q9H9J2	332 aa	Known RBP	13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	PANK4	Q9NVE7	773 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	RAPGEFL1	Q9UHV5	662 aa		13.15	□□□□□ -0.3
KLC1-222	ENST00000557143	TRIO	O75962	3097 aa		13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	FRMD3	A2A2Y4	597 aa		13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	PODXL	O00592	558 aa		13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	OGT	O15294	1046 aa		13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	TGM5	O43548	720 aa		13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	PRPF6	O94906	941 aa	Known RBP	13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	CLTA	P09496	248 aa		13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	HOXD13	P35453	343 aa		13.14	□□□□□ -0.31
KLC1-222	ENST00000557143	USP46	P62068	366 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms