RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ACACAQ13085 2346 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 CCINQ13939 588 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 TRIP6Q15654 476 aaKnown RBP6.46□□□□□ -1.38
ATXN3-245ENST00000556958 MAPK6Q16659 721 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 TRIM61Q5EBN2 209 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 FUT10Q6P4F1 479 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 ABHD15Q6UXT9 468 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 HAUS6Q7Z4H7 955 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 MRPL10Q7Z7H8 261 aaKnown RBP6.46□□□□□ -1.38
ATXN3-245ENST00000556958 COLGALT2Q8IYK4 626 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 CNNM3Q8NE01 707 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 SPATA18Q8TC71 538 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 PIGKQ92643 395 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 FAM167AQ96KS9 214 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 ASB16Q96NS5 453 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 RIOX1Q9H6W3 641 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 NRBP2Q9NSY0 501 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 MARCH5Q9NX47 278 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 MAP10Q9P2G4 905 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 EBF1Q9UH73 591 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 PCDHB2Q9Y5E7 798 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 ADAMTS20P59510 1910 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 MYH4Q9Y623 1939 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 CFAP46Q8IYW2 2715 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 COL4A3Q01955 1670 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 APC2O95996 2303 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 MYH7BA7E2Y1 1941 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 SPDYE3A6NKU9 549 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 PATE3B3GLJ2 98 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 B8ZZF3 427 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 MEIS2O14770 477 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ZNF213O14771 459 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 MSTNO14793 375 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 DCLK1O15075 740 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 TRAK2O60296 914 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 APBB3O95704 486 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ADH1CP00326 375 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ITGB2P05107 769 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ENGP17813 658 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 FCARP24071 287 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ZNF76P36508 570 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 CSRP3P50461 194 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 HAND2P61296 217 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 GRSF1Q12849 480 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATXN3-245ENST00000556958 RNFT1Q5M7Z0 435 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 IFIT1BQ5T764 474 aaKnown RBP6.45□□□□□ -1.38
ATXN3-245ENST00000556958 CYP4A22Q5TCH4 519 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 VPS53Q5VIR6 699 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 PMS2CLQ68D20 193 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 VITQ6UXI7 678 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 CATSPER4Q7RTX7 472 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 GPR155Q7Z3F1 870 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 Q8N3U1 123 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 LRRC71Q8N4P6 559 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ENAHQ8N8S7 591 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-245ENST00000556958 PIP4K2CQ8TBX8 421 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 WBP1Q96G27 269 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 CRELD1Q96HD1 420 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ZNF668Q96K58 619 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-245ENST00000556958 B3GALT6Q96L58 329 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 CLSTN3Q9BQT9 956 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 MXRA8Q9BRK3 442 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 UBAC1Q9BSL1 405 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 TTPALQ9BTX7 342 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 GPR62Q9BZJ7 368 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 GPR88Q9GZN0 384 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 PRORYQ9H606 182 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 PSTPIP2Q9H939 334 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 TRPV4Q9HBA0 871 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 POLMQ9NP87 494 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-245ENST00000556958 HELLSQ9NRZ9 838 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 HCFC1R1Q9NWW0 138 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 MAD2L2Q9UI95 211 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ADAM28Q9UKQ2 775 aa6.45□□□□□ -1.38
ATXN3-245ENST00000556958 SF3B1O75533 1304 aaKnown RBP eCLIP6.45□□□□□ -1.384e-12■■■■■ 275.7
ATXN3-245ENST00000556958 URB1O60287 2271 aaKnown RBP6.45□□□□□ -1.38
ATXN3-245ENST00000556958 ANKRD17O75179 2603 aaKnown RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 SLC38A8A6NNN8 435 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 ARNTLO00327 626 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 RRP8O43159 456 aaKnown RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 CSDE1O75534 798 aaKnown RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 LRG1P02750 347 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 FTH1P19P0C7X4 201 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 ITGA4P13612 1032 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 CEBPBP17676 345 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 HOXC13P31276 330 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 ELF1P32519 619 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 DHPSP49366 369 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 AFF1P51825 1210 aaKnown RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 FAM193AP78312 1265 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 GFPT1Q06210 699 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-245ENST00000556958 DSC1Q08554 894 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 SLC14A1Q13336 389 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 RAB33AQ14088 237 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 PON2Q15165 354 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 PSMD5Q16401 504 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 SLC5A9Q2M3M2 681 aa6.44□□□□□ -1.38
ATXN3-245ENST00000556958 PLA2G4EQ3MJ16 856 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms