RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 CDK5RAP3Q96JB5 506 aa18.76■□□□□ 0.59
CHGA-206ENST00000556876 SNX27Q96L92 541 aa18.76■□□□□ 0.59
CHGA-206ENST00000556876 TARS2Q9BW92 718 aaKnown RBP18.76■□□□□ 0.59
CHGA-206ENST00000556876 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.76■□□□□ 0.59
CHGA-206ENST00000556876 LARSQ9P2J5 1176 aaKnown RBP18.76■□□□□ 0.59
CHGA-206ENST00000556876 DNMT3BQ9UBC3 853 aaKnown RBP18.76■□□□□ 0.59
CHGA-206ENST00000556876 USP20Q9Y2K6 914 aa18.76■□□□□ 0.59
CHGA-206ENST00000556876 E9PMD0 336 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 CLDN3O15551 220 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 XPOTO43592 962 aaKnown RBP18.75■□□□□ 0.59
CHGA-206ENST00000556876 EDN1P05305 212 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 PLS3P13797 630 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 MARCKSP29966 332 aaPredicted RBP18.75■□□□□ 0.59
CHGA-206ENST00000556876 MLF2Q15773 248 aaPredicted RBP18.75■□□□□ 0.59
CHGA-206ENST00000556876 ZNF528Q3MIS6 628 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 VARS2Q5ST30 1063 aaKnown RBP18.75■□□□□ 0.59
CHGA-206ENST00000556876 CYP4A22Q5TCH4 519 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 IQCEQ6IPM2 695 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 ERMP1Q7Z2K6 904 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 NPAS3Q8IXF0 933 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 DAW1Q8N136 415 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 SYT2Q8N9I0 419 aaPredicted RBP18.75■□□□□ 0.59
CHGA-206ENST00000556876 AK8Q96MA6 479 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 DDX23Q9BUQ8 820 aaKnown RBP18.75■□□□□ 0.59
CHGA-206ENST00000556876 DLGAP2Q9P1A6 1054 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 FBXO4Q9UKT5 387 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 VPS13AQ96RL7 3174 aa18.75■□□□□ 0.59
CHGA-206ENST00000556876 DCNP07585 359 aaKnown RBP18.74■□□□□ 0.59
CHGA-206ENST00000556876 RHOP08100 348 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 NTHL1P78549 312 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 ROR1Q01973 937 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 MRPL58Q14197 206 aaKnown RBP18.74■□□□□ 0.59
CHGA-206ENST00000556876 NOLC1Q14978 699 aaKnown RBP eCLIP18.74■□□□□ 0.59
CHGA-206ENST00000556876 RABEP1Q15276 862 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 SPECC1Q5M775 1068 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 MCTP1Q6DN14 999 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 ZNF280DQ6N043 979 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 CD300LGQ6UXG3 332 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 ITFG1Q8TB96 612 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 KCNN1Q92952 543 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 ELSPBP1Q96BH3 223 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 SUSD3Q96L08 255 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 CXCL16Q9H2A7 254 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 POLD4Q9HCU8 107 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 DMDP11532 3685 aa18.74■□□□□ 0.59
CHGA-206ENST00000556876 MTCL1Q9Y4B5 1905 aaKnown RBP18.73■□□□□ 0.59
CHGA-206ENST00000556876 TBC1D4O60343 1298 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 CLTAP09496 248 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 OSTNP61366 133 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 ATP2C1P98194 919 aaPredicted RBP18.73■□□□□ 0.59
CHGA-206ENST00000556876 SNW1Q13573 536 aaKnown RBP18.73■□□□□ 0.59
CHGA-206ENST00000556876 NBR1Q14596 966 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 ZBTB41Q5SVQ8 909 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 DNASE1L2Q92874 299 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 ZNF512Q96ME7 567 aaPredicted RBP18.73■□□□□ 0.59
CHGA-206ENST00000556876 RUSC1Q9BVN2 902 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 GPR88Q9GZN0 384 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 CYP4F11Q9HBI6 524 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 AFF4Q9UHB7 1163 aaKnown RBP18.73■□□□□ 0.59
CHGA-206ENST00000556876 C2orf16Q68DN1 1984 aa18.73■□□□□ 0.59
CHGA-206ENST00000556876 H3BQV1 296 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 MAN2B1O00754 1011 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 SLC16A4O15374 487 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 LAMTOR5O43504 91 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 BMP15O95972 392 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 SP9P0CG40 484 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 CYP3A5P20815 502 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 BRCC3P46736 316 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 MCM2P49736 904 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 MCL1Q07820 350 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 MAPK7Q13164 816 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 PLD1Q13393 1074 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 ZNF852Q6ZMS4 543 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 PDZD4Q76G19 769 aaPredicted RBP18.72■□□□□ 0.59
CHGA-206ENST00000556876 CEP120Q8N960 986 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 C3orf58Q8NDZ4 430 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 TMEM161BQ8NDZ6 487 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 E2F7Q96AV8 911 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 ZMAT2Q96NC0 199 aaKnown RBP18.72■□□□□ 0.59
CHGA-206ENST00000556876 IER2Q9BTL4 223 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 RPP25Q9BUL9 199 aaKnown RBP18.72■□□□□ 0.59
CHGA-206ENST00000556876 GOLGA2P5Q9HBQ8 144 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 ZFP14Q9HCL3 533 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 ODF2LQ9ULJ1 636 aa18.72■□□□□ 0.59
CHGA-206ENST00000556876 PLXNA3P51805 1871 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 FAM170BA6NMN3 283 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 MCM4P33991 863 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 MATR3P43243 847 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHGA-206ENST00000556876 ID4P47928 161 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 SOX4Q06945 474 aaPredicted RBP18.71■□□□□ 0.59
CHGA-206ENST00000556876 ZRSR1Q15695 479 aaKnown RBP18.71■□□□□ 0.59
CHGA-206ENST00000556876 C1orf228Q6PIY5 440 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 TAS1R3Q7RTX0 852 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 CD302Q8IX05 232 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 KIF2CQ99661 725 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 MMTAG2Q9BU76 263 aaKnown RBP18.71■□□□□ 0.59
CHGA-206ENST00000556876 UPF2Q9HAU5 1272 aaKnown RBP18.71■□□□□ 0.59
CHGA-206ENST00000556876 TRPV5Q9NQA5 729 aa18.71■□□□□ 0.59
CHGA-206ENST00000556876 HCFC1R1Q9NWW0 138 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms