RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 GPR87Q9BY21 358 aa6.7□□□□□ -1.34
HIF1A-209ENST00000556827 PRDM11Q9NQV5 511 aa6.7□□□□□ -1.34
HIF1A-209ENST00000556827 TNKSO95271 1327 aa6.7□□□□□ -1.34
HIF1A-209ENST00000556827 WDR33Q9C0J8 1336 aaKnown RBP6.7□□□□□ -1.34
HIF1A-209ENST00000556827 FSBPO95073 299 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 LY86O95711 162 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 GAAP10253 952 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 XPAP23025 273 aaPredicted RBP6.69□□□□□ -1.34
HIF1A-209ENST00000556827 KIR2DL3P43628 341 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 CLUL1Q15846 466 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 FNDC7Q5VTL7 733 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 AMER2Q8N7J2 671 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 PPP1R14CQ8TAE6 165 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 AUTS2Q8WXX7 1259 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 CLIP3Q96DZ5 547 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 SLC2A4RGQ9NR83 387 aa6.69□□□□□ -1.34
HIF1A-209ENST00000556827 ANKARQ7Z5J8 1434 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PCDHGA12O60330 932 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 MFAP3LO75121 409 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 IPO13O94829 963 aaKnown RBP6.68□□□□□ -1.34
HIF1A-209ENST00000556827 GPR15P49685 360 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 MRPS9P82933 396 aaKnown RBP6.68□□□□□ -1.34
HIF1A-209ENST00000556827 SPIDRQ14159 915 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PTPN21Q16825 1174 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 ELOA2Q8IYF1 753 aaPredicted RBP6.68□□□□□ -1.34
HIF1A-209ENST00000556827 CMTM4Q8IZR5 234 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 ATXN2LQ8WWM7 1075 aaKnown RBP6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PGBD4Q96DM1 585 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 CHFRQ96EP1 664 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 FUBP3Q96I24 572 aaKnown RBP eCLIP6.68□□□□□ -1.34
HIF1A-209ENST00000556827 FAXDC2Q96IV6 333 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 ZNF512Q96ME7 567 aaPredicted RBP6.68□□□□□ -1.34
HIF1A-209ENST00000556827 OSBPL6Q9BZF3 934 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 IFT122Q9HBG6 1241 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 ING3Q9NXR8 418 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PCDHGA9Q9Y5G4 932 aaKnown RBP6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PCDHGA8Q9Y5G5 932 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PCDHGA7Q9Y5G6 932 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PCDHGA6Q9Y5G7 932 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PCDHGA3Q9Y5H0 932 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 PCDHGA2Q9Y5H1 932 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 KIF1AQ12756 1690 aa6.68□□□□□ -1.34
HIF1A-209ENST00000556827 NRXN1Q9ULB1 1477 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 FZD9O00144 591 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 PDGFRBP09619 1106 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 GNAT2P19087 354 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 DPTQ07507 201 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 MUM1Q2TAK8 710 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 NBPF8Q3BBV2 869 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 LMBR1LQ6UX01 489 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 AMOTL1Q8IY63 956 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 MSL3Q8N5Y2 521 aaKnown RBP6.67□□□□□ -1.34
HIF1A-209ENST00000556827 RSAD2Q8WXG1 361 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 MKS1Q9NXB0 559 aa6.67□□□□□ -1.34
HIF1A-209ENST00000556827 A0A1W2PR48 441 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 GOLGA6L6A8MZA4 724 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 OVOL3O00110 214 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 NRP1O14786 923 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 MTSS1O43312 755 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 NRP2O60462 931 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 TMEM127O75204 238 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 PEX11BO96011 259 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 MTNR1BP49286 362 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 INHBCP55103 352 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 NRG3P56975 720 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 EXOSC10Q01780 885 aaKnown RBP6.66□□□□□ -1.34
HIF1A-209ENST00000556827 TOB2Q14106 344 aaPredicted RBP6.66□□□□□ -1.34
HIF1A-209ENST00000556827 ACAP2Q15057 778 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 ABHD15Q6UXT9 468 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 GLB1L2Q8IW92 636 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 PPM1NQ8N819 430 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 EPC1Q9H2F5 836 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 GPR45Q9Y5Y3 372 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 SPATA31A5Q5VU36 1347 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 SPATA31A7Q8IWB4 1347 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 PPLO60437 1756 aa6.66□□□□□ -1.34
HIF1A-209ENST00000556827 USP32Q8NFA0 1604 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 SHTN1A0MZ66 631 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 TRIM75PA6NK02 468 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 XPOTO43592 962 aaKnown RBP6.65□□□□□ -1.34
HIF1A-209ENST00000556827 FAM20BO75063 409 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 RPS6KA4O75676 772 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 ALDH1A2O94788 518 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 RBP3P10745 1247 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 AGXTP21549 392 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 SLC25A3Q00325 362 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 ODF1Q14990 250 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 UBE3CQ15386 1083 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 CCDC178Q5BJE1 867 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 JADE3Q92613 823 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 LARP4BQ92615 738 aaKnown RBP6.65□□□□□ -1.34
HIF1A-209ENST00000556827 CEP89Q96ST8 783 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 ACE2Q9BYF1 805 aaPredicted RBP6.65□□□□□ -1.34
HIF1A-209ENST00000556827 IKZF4Q9H2S9 585 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 DMRT3Q9NQL9 472 aa6.65□□□□□ -1.34
HIF1A-209ENST00000556827 GLI3P10071 1580 aa6.65□□□□□ -1.35
HIF1A-209ENST00000556827 KLRG2A4D1S0 409 aaPredicted RBP6.64□□□□□ -1.35
HIF1A-209ENST00000556827 PRAMEF4O60810 478 aa6.64□□□□□ -1.35
HIF1A-209ENST00000556827 STC2O76061 302 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms