RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SKOR1P84550 965 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 SPA17Q15506 151 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 DCAF17Q5H9S7 520 aaPredicted RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 ANGEL2Q5VTE6 544 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 FAM47EQ6ZV65 393 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 MCF2L2Q86YR7 1114 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CREG2Q8IUH2 290 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 ANKRD13CQ8N6S4 541 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PACSIN1Q9BY11 444 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 FUT8Q9BYC5 575 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 AGPAT3Q9NRZ7 376 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TELO2Q9Y4R8 837 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PCDHB13Q9Y5F0 798 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 UBE4BO95155 1302 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CTAGE15A4D2H0 777 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TEX28O15482 410 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 P4HBP07237 508 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CTAGE8P0CG41 777 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TSPAN7P41732 249 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 SKIV2L2P42285 1042 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PAPOLAP51003 745 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 HIRAP54198 1017 aaPredicted RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PTK2Q05397 1052 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 SLC18A3Q16572 532 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 EXOC3L4Q17RC7 722 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 SLC9C1Q4G0N8 1177 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CBWD6Q4V339 395 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TDRD12Q587J7 1177 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CBWD3Q5JTY5 395 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CBWD5Q5RIA9 395 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 BEND6Q5SZJ8 279 aaPredicted RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 GJB7Q6PEY0 223 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PADI6Q6TGC4 694 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CTAGE6Q86UF2 777 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 GATAD2AQ86YP4 633 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CTAGE4Q8IX94 777 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 FAM178BQ8IXR5 827 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TRIM58Q8NG06 486 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 COG1Q8WTW3 980 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 GLMNQ92990 594 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 RBM41Q96IZ5 413 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 C12orf42Q96LP6 360 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 WRNIP1Q96S55 665 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 GPR88Q9GZN0 384 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 DRC3Q9H069 523 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 QPCTLQ9NXS2 382 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PSD3Q9NYI0 1048 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 ADAMTS1Q9UHI8 967 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CD2APQ9Y5K6 639 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 DNAH12Q6ZR08 3092 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 A6NCN8 305 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 KLHL41O60662 606 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PRMT3O60678 531 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 LYPLA2O95372 231 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 KLRC1P26715 233 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 LIG3P49916 1009 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 HMGCS2P54868 508 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 BPIFB3P59826 476 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TTLL12Q14166 644 aaPredicted RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 RNF207Q6ZRF8 634 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 MIER3Q7Z3K6 550 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 ZNF571Q7Z3V5 609 aaPredicted RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TTC39CQ8N584 583 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 PDCD7Q8N8D1 485 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 ZSWIM2Q8NEG5 633 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 LILRB1Q8NHL6 650 aaPredicted RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 ACMSDQ8TDX5 336 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 HNRNPLLQ8WVV9 542 aaKnown RBP5.43□□□□□ -1.54
TMEM260-210ENST00000556422 KLRG1Q96E93 195 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 CABS1Q96KC9 395 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 RMDN3Q96TC7 470 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TSC22D3Q99576 134 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 TLR10Q9BXR5 811 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 SUGCTQ9HAC7 445 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 GCNT4Q9P109 453 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 MCM8Q9UJA3 840 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 SNX12Q9UMY4 172 aa5.43□□□□□ -1.54
TMEM260-210ENST00000556422 MCM3APO60318 1980 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TARSL2A2RTX5 802 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 MAP2K7O14733 419 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PAHP00439 452 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 RHOXF2BP0C7M4 288 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 EPB41P11171 864 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 RPL13P26373 211 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PRKCIP41743 596 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 MAGEA1P43355 309 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 USP14P54578 494 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ARID5AQ03989 594 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TUBA3CQ13748 450 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TMEM132BQ14DG7 1078 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 NCCRP1Q6ZVX7 275 aaPredicted RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ZNF572Q7Z3I7 529 aaPredicted RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 DNAAF5Q86Y56 855 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TMEM174Q8WUU8 243 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TEKT4Q8WW24 435 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 CAPZA3Q96KX2 299 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 C8orf48Q96LL4 319 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ALS2CR12Q96Q35 445 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 RHOXF2Q9BQY4 288 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 MKNK1Q9BUB5 465 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms