RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 KRBA2Q6ZNG9 492 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 MFSD6Q6ZSS7 791 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 PNMA8AQ86V59 439 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 SGMS1Q86VZ5 419 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 NOSTRINQ8IVI9 506 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 FAM178BQ8IXR5 827 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 ELOA2Q8IYF1 753 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 TMTC2Q8N394 836 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 PDILTQ8N807 584 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 TXNDC5Q8NBS9 432 aaKnown RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 KREMEN2Q8NCW0 462 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 TTLL11Q8NHH1 800 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 LPIN2Q92539 896 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 GOLGA1Q92805 767 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 TOE1Q96GM8 510 aaKnown RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 CTAGE1Q96RT6 745 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 TMEM209Q96SK2 561 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 MPHOSPH8Q99549 860 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 BAG1Q99933 345 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 SSBP3Q9BWW4 388 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 NAA15Q9BXJ9 866 aaKnown RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 PUS3Q9BZE2 481 aaKnown RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 BCAS3Q9H6U6 928 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 CAPN10Q9HC96 672 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 DTLQ9NZJ0 730 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 TUBE1Q9UJT0 475 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 HPSEQ9Y251 543 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 MORC2Q9Y6X9 1032 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-241ENST00000556374 SZT2Q5T011 3432 aa4.93□□□□□ -1.62
ATXN3-241ENST00000556374 CEP290O15078 2479 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 DUOX1Q9NRD9 1551 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 A0A087WWV3 80 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 FAM237AA0A1B0GTK4 181 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 USP27XA6NNY8 438 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 EFCAB8A8MWE9 144 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 KIF28PB7ZC32 967 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 KIF5CO60282 957 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ERLIN1O75477 346 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 MBD4O95243 580 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 MMP1P03956 469 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CCDC175P0C221 793 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CALM1P0DP23 149 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CALM2P0DP24 149 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CALM3P0DP25 149 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 FDPSP14324 419 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ZNF28P17035 718 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ZSCAN20P17040 1043 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 IFNAR1P17181 557 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 KRT2P35908 639 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 LIFRP42702 1097 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 MCAMP43121 646 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 PLCD1P51178 756 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ANTXR2P58335 489 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TUBB4BP68371 445 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 SPAG1Q07617 926 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 MAP4K2Q12851 820 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 SMAD4Q13485 552 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 PNOCQ13519 176 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TUBB2AQ13885 445 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TRIM14Q14142 442 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ALX1Q15699 326 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CR1LQ2VPA4 569 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CT47A1Q5JQC4 288 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 AKNAD1Q5T1N1 836 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 SPECC1LQ69YQ0 1117 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 OTUD7BQ6GQQ9 843 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ISM2Q6H9L7 571 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ARMCX5Q6P1M9 558 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 PKN3Q6P5Z2 889 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 FBXO38Q6PIJ6 1188 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CTU1Q7Z7A3 348 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CATIPQ7Z7H3 387 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 C2CD5Q86YS7 1000 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TBC1D10CQ8IV04 446 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 VSTM4Q8IW00 320 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TEX2Q8IWB9 1127 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TRIM48Q8IWZ4 208 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 DIS3L2Q8IYB7 885 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 DDX1Q92499 740 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ESR2Q92731 530 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 ERCC4Q92889 916 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 PHKBQ93100 1093 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 FAM89AQ96GI7 184 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TUBB2BQ9BVA1 445 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 PUS7LQ9H0K6 701 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 FOXP1Q9H334 677 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 SEMA4AQ9H3S1 761 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 SMOC1Q9H4F8 434 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 L2HGDHQ9H9P8 463 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 GNL3LQ9NVN8 582 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 RBM28Q9NW13 759 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 RMND1Q9NWS8 449 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 RAI14Q9P0K7 980 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 CALCOCO1Q9P1Z2 691 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 PRKAG3Q9UGI9 489 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 TRMT112Q9UI30 125 aaKnown RBP4.92□□□□□ -1.62
ATXN3-241ENST00000556374 NUB1Q9Y5A7 615 aa4.92□□□□□ -1.62
ATXN3-241ENST00000556374 V9GYY5 206 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms