RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 YARSP54577 528 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 CLCQ05315 142 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ZNF543Q08ER8 600 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SF3A1Q15459 793 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 PTPN21Q16825 1174 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 USH1GQ495M9 461 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SFRP5Q5T4F7 317 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 MCATQ8IVS2 390 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 MRPL41Q8IXM3 137 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 UBALD2Q8IYN6 164 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ADSSL1Q8N142 457 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 MICAL1Q8TDZ2 1067 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 CPLX3Q8WVH0 158 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SUSD6Q92537 303 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ZNF689Q96CS4 500 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 GPATCH3Q96I76 525 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 TMEM87BQ96K49 555 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SEC62Q99442 399 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 TLE6Q9H808 572 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 CARS2Q9HA77 564 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 MLXIPQ9HAP2 919 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ATP13A1Q9HD20 1204 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ZBTB40Q9NUA8 1239 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ANAPC4Q9UJX5 808 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 MRPL11Q9Y3B7 192 aaKnown RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 ST14Q9Y5Y6 855 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 BRWD1Q9NSI6 2320 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 SCN10AQ9Y5Y9 1956 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 GBF1Q92538 1859 aa5.6□□□□□ -1.51
ATXN3-239ENST00000556315 COL11A1P12107 1806 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-239ENST00000556315 TRANK1O15050 2925 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 ABCB11O95342 1321 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 ADGRA3Q8IWK6 1321 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 FSD2A1L4K1 749 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 RBAK-RBAKDNI3L0D1 243 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 SMARCA5O60264 1052 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 DGKIO75912 1065 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 CSPG5O95196 566 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 GGPS1O95749 300 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 CHRNA1P02708 482 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 ITGB1P05556 798 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 DNAJB1P25685 340 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 GDNFP39905 211 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 RAP1GAPP47736 663 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 ALX1Q15699 326 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 GPATCH4Q5T3I0 446 aaKnown RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 FBXW10Q5XX13 1052 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 ADGRD2Q7Z7M1 963 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 RBM23Q86U06 439 aaKnown RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 C1QL4Q86Z23 238 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 MFSD4AQ8N468 514 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 MFSD2AQ8NA29 543 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 FAM13CQ8NE31 585 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 OR6P1Q8NGX9 317 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 ATP8B4Q8TF62 1192 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 POF1BQ8WVV4 589 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 ACSF2Q96CM8 615 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 KIRREL1Q96J84 757 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 NEK1Q96PY6 1258 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 PPP1R16BQ96T49 567 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 CDCA3Q99618 268 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 SRRTQ9BXP5 876 aaKnown RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 PXMP2Q9NR77 195 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 TOMM22Q9NS69 142 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 SETD4Q9NVD3 440 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 MAP3K20Q9NYL2 800 aaKnown RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 TJP2Q9UDY2 1190 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 BARX2Q9UMQ3 279 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 DDX19BQ9UMR2 479 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 CAPN6Q9Y6Q1 641 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
ATXN3-239ENST00000556315 PARP14Q460N5 1801 aa5.59□□□□□ -1.51
ATXN3-239ENST00000556315 TECTAO75443 2155 aa5.59□□□□□ -1.52
ATXN3-239ENST00000556315 TET1Q8NFU7 2136 aa5.59□□□□□ -1.52
ATXN3-239ENST00000556315 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 ZFHX2Q9C0A1 2572 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 MEIS3P2A8K0S8 358 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 NOP56O00567 594 aaKnown RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 PDGFBP01127 241 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 KRT1P04264 644 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 LGALS2P05162 132 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 STAG3L1P0CL83 205 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 MYCLP12524 364 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 HOXB8P17481 243 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 CFPP27918 469 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 CLCN5P51795 746 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 SP2Q02086 613 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 UBE3AQ05086 875 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 CDC37Q16543 378 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 NKG7Q16617 165 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 RRP12Q5JTH9 1297 aaKnown RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 TAF2Q6P1X5 1199 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms