RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 TAX1BP1Q86VP1 789 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-233ENST00000555816 DIS3LQ8TF46 1054 aaKnown RBP6.06□□□□□ -1.44
ATXN3-233ENST00000555816 MKL1Q969V6 931 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 MENTQ9BUN1 341 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 ARHGEF4Q9NR80 690 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 OGDHLQ9ULD0 1010 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 TELO2Q9Y4R8 837 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 A0A0C4DFX4 3053 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 PSME4Q14997 1843 aa6.06□□□□□ -1.44
ATXN3-233ENST00000555816 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
ATXN3-233ENST00000555816 DLG5Q8TDM6 1919 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 MAST3O60307 1309 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 MROH5Q6ZUA9 1318 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 ACOT7O00154 380 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 AQP7O14520 342 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 IL18BPO95998 194 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 LTFP02788 710 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 HMGCRP04035 888 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 GJA4P35212 333 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 TCP10Q12799 353 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 NTRK3Q16288 839 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 EPHA10Q5JZY3 1008 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 BEND3Q5T5X7 828 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 GADL1Q6ZQY3 521 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 RBM12BQ8IXT5 1001 aaKnown RBP6.05□□□□□ -1.44
ATXN3-233ENST00000555816 GUCD1Q96NT3 240 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 GNRHR2Q96P88 292 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 C9orf78Q9NZ63 289 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-233ENST00000555816 GJD2Q9UKL4 321 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 MSRB2Q9Y3D2 182 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 AFG3L2Q9Y4W6 797 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 HS3ST3A1Q9Y663 406 aa6.05□□□□□ -1.44
ATXN3-233ENST00000555816 RPAP1Q9BWH6 1393 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-233ENST00000555816 FAM221BA6H8Z2 402 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 GRM8O00222 908 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 GSTA4O15217 222 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 CR2P20023 1033 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 GCLCP48506 637 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-233ENST00000555816 PAK1Q13153 545 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 TOP3AQ13472 1001 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-233ENST00000555816 GPR19Q15760 415 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 FAM110CQ1W6H9 321 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 BTBD8Q5XKL5 378 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 CDC42EP5Q6NZY7 148 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 RNF207Q6ZRF8 634 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 MAMDC2Q7Z304 686 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-233ENST00000555816 SCUBE1Q8IWY4 988 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 SCYL3Q8IZE3 742 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 ANKRD13CQ8N6S4 541 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 LRRC37BQ96QE4 947 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 ADOQ96SZ5 270 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 PUS3Q9BZE2 481 aaKnown RBP6.04□□□□□ -1.44
ATXN3-233ENST00000555816 LRRFIP2Q9Y608 721 aaKnown RBP6.04□□□□□ -1.44
ATXN3-233ENST00000555816 SLC30A1Q9Y6M5 507 aa6.04□□□□□ -1.44
ATXN3-233ENST00000555816 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 PDE8BO95263 885 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 RPS19P39019 145 aaKnown RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 ETV4P43268 484 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 NFYCQ13952 458 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 METTL24Q5JXM2 366 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 PHF19Q5T6S3 580 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 AGBL4Q5VU57 503 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 POLNQ7Z5Q5 900 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 DEPDC7Q96QD5 511 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 SRPK1Q96SB4 655 aaKnown RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 CDX2Q99626 313 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 LBHD1Q9BQE6 289 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 TACO1Q9BSH4 297 aaKnown RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 CCDC113Q9H0I3 377 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 IPPKQ9H8X2 491 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 SNTG2Q9NY99 539 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 SRPK3Q9UPE1 567 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 AGTPBP1Q9UPW5 1226 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 ZNF646O15015 1829 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-233ENST00000555816 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
ATXN3-233ENST00000555816 COL6A3P12111 3177 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 TRIM75PA6NK02 468 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 ENTPD3O75355 529 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 ALDH1L1O75891 902 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 IFIT1P09914 478 aaKnown RBP6.02□□□□□ -1.45
ATXN3-233ENST00000555816 PTPN1P18031 435 aaKnown RBP6.02□□□□□ -1.45
ATXN3-233ENST00000555816 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 EP400NLQ6ZTU2 488 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 GPR155Q7Z3F1 870 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 AMER2Q8N7J2 671 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 MAFAQ8NHW3 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-233ENST00000555816 PTPRN2Q92932 1015 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 ZNF503Q96F45 646 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 MRFAP1L1Q96HT8 127 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 IDI2Q9BXS1 227 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 ZDHHC5Q9C0B5 715 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 OAZ3Q9UMX2 235 aa6.02□□□□□ -1.45
ATXN3-233ENST00000555816 PFASO15067 1338 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 KIF16BQ96L93 1317 aa6.01□□□□□ -1.45
ATXN3-233ENST00000555816 ESYT3A0FGR9 886 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms