RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PHLDB3Q6NSJ2 640 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 TMEM139Q8IV31 216 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 ANKLE1Q8NAG6 615 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 SMG8Q8ND04 991 aaKnown RBP10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 DIS3LQ8TF46 1054 aaKnown RBP10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 TATDN2Q93075 761 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 ELMO3Q96BJ8 720 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 SNX27Q96L92 541 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 CHP1Q99653 195 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 STK33Q9BYT3 514 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 IMPG2Q9BZV3 1241 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 PLEKHA5Q9HAU0 1116 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 C1orf112Q9NSG2 853 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 KLK14Q9P0G3 267 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 FBXL5Q9UKA1 691 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 MYO6Q9UM54 1294 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 ATP11BQ9Y2G3 1177 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 PCDHB2Q9Y5E7 798 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 PCNTO95613 3336 aa10.41□□□□□ -0.74
HNRNPC-220ENST00000555585 TRIP11Q15643 1979 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 SOWAHDA6NJG2 315 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 MEFVO15553 781 aaPredicted RBP10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 ZC3H11AO75152 810 aaKnown RBP eCLIP10.4□□□□□ -0.745e-13■■□□□ 12.3
HNRNPC-220ENST00000555585 GFPT2O94808 682 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 CST3P01034 146 aaPredicted RBP10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 FECHP22830 423 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 TLE2Q04725 743 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 MEA1Q16626 185 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 TRIM60Q495X7 471 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 TDRD12Q587J7 1177 aaKnown RBP10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 WDR59Q6PJI9 974 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 TRAF7Q6Q0C0 670 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 NT5DC4Q86YG4 428 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 SYN2Q92777 582 aaPredicted RBP10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 PAWRQ96IZ0 340 aaKnown RBP10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 FAM81BQ96LP2 452 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 ADAM2Q99965 735 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 DEF6Q9H4E7 631 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 C11orf49Q9H6J7 331 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 FAM105AQ9NUU6 356 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 DPP3Q9NY33 737 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 PLAGL2Q9UPG8 496 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 DERAQ9Y315 318 aa10.4□□□□□ -0.74
HNRNPC-220ENST00000555585 HTTP42858 3142 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 PDCD11Q14690 1871 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 MGEA5O60502 916 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 ITGB3P05106 788 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 SERPING1P05155 500 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 PNMA6AP0CW24 399 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 COL6A1P12109 1028 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 FERP16591 822 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 HNRNPH3P31942 346 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 CYLC1P35663 651 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 SOX5P35711 763 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 USP8P40818 1118 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 RAB27AP51159 221 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 GUCY2FP51841 1108 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 JAM2P57087 298 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 MYL6P60660 151 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 KLHL30Q0D2K2 578 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 DSC3Q14574 896 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 MBTPS1Q14703 1052 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 MTF1Q14872 753 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 SGSM1Q2NKQ1 1148 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 GLRA4Q5JXX5 417 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 E4F1Q66K89 784 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 SPOPLQ6IQ16 392 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 RAD9BQ6WBX8 426 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 ANKRD33Q7Z3H0 272 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 FMNL3Q8IVF7 1028 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 C17orf53Q8N3J3 647 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 RNF169Q8NCN4 708 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 BEST2Q8NFU1 509 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 KIAA1524Q8TCG1 905 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 HELQQ8TDG4 1101 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 KAT5Q92993 513 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 PGBD4Q96DM1 585 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 IFIH1Q9BYX4 1025 aaKnown RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 PPP1R12CQ9BZL4 782 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 MCOLN1Q9GZU1 580 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 HIPK3Q9H422 1215 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 NHEJ1Q9H9Q4 299 aaPredicted RBP10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 PRDM10Q9NQV6 1147 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 AIPL1Q9NZN9 384 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 AGAP1Q9UPQ3 857 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 C2CD2Q9Y426 696 aa10.39□□□□□ -0.75
HNRNPC-220ENST00000555585 F8VZ95 297 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 FOXN3O00409 490 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 OFD1O75665 1012 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 PLEKP08567 350 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 CCDC172P0C7W6 258 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 SKIP12755 728 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 CAPN2P17655 700 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 POLR2BP30876 1174 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 EIF4A3P38919 411 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 KCNJ6P48051 423 aa10.38□□□□□ -0.75
HNRNPC-220ENST00000555585 NOP14P78316 857 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms