RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZFP36P26651 326 aaKnown RBP4□□□□□ -1.77
SCFD1-213ENST00000554776 PTGS2P35354 604 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 CLRN1P58418 232 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 NHLH2Q02577 135 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 KLF10Q13118 480 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 SYCP2LQ5T4T6 812 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 METRNLQ641Q3 311 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 PPP4R4Q6NUP7 873 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 SEM1Q6ZVN7 128 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 GDF7Q7Z4P5 450 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 GRAMD1CQ8IYS0 662 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 AMER2Q8N7J2 671 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 DCBLD1Q8N8Z6 715 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 RNF169Q8NCN4 708 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 LENG9Q96B70 501 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 MRGPRX4Q96LA9 322 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 SORCS2Q96PQ0 1159 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 DMRTA2Q96SC8 542 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 POLR3GLQ9BT43 218 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 MRI1Q9BV20 369 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 SLC46A2Q9BY10 475 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 GTPBP4Q9BZE4 634 aaKnown RBP4□□□□□ -1.77
SCFD1-213ENST00000554776 ZNF768Q9H5H4 540 aaKnown RBP4□□□□□ -1.77
SCFD1-213ENST00000554776 ARNT2Q9HBZ2 717 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 CHST12Q9NRB3 414 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 TDP1Q9NUW8 608 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 FAM30AQ9NZY2 134 aa4□□□□□ -1.77
SCFD1-213ENST00000554776 TEX33O43247 280 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 CAND2O75155 1236 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 RPS6KA4O75676 772 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 ADH4P08319 380 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 RAP2AP10114 183 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 VCAM1P19320 739 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 PDCP20941 246 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 TLE1Q04724 770 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 GTF2H3Q13889 308 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 LLGL1Q15334 1064 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 DACT2Q5SW24 774 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 ATXN7L2Q5T6C5 722 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-213ENST00000554776 FAM102AQ5T9C2 384 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-213ENST00000554776 B3GNT9Q6UX72 402 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 USP45Q70EL2 814 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 MRGPREQ86SM8 312 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 DGKHQ86XP1 1220 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 PLXDC1Q8IUK5 500 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 ZFPM1Q8IX07 1006 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 CCAR1Q8IX12 1150 aaKnown RBP3.99□□□□□ -1.77
SCFD1-213ENST00000554776 DRC7Q8IY82 874 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 SLC35G2Q8TBE7 412 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 HAS1Q92839 578 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 TMX3Q96JJ7 454 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 MYOCQ99972 504 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 NRDE2Q9H7Z3 1164 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 TRPM5Q9NZQ8 1165 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 POGKQ9P215 609 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 ING1Q9UK53 422 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-213ENST00000554776 FZD1Q9UP38 647 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 FAM50BQ9Y247 325 aa3.99□□□□□ -1.77
SCFD1-213ENST00000554776 RUVBL1Q9Y265 456 aaKnown RBP3.99□□□□□ -1.77
SCFD1-213ENST00000554776 REXO2Q9Y3B8 237 aaKnown RBP3.99□□□□□ -1.77
SCFD1-213ENST00000554776 FRMPD2Q68DX3 1309 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-213ENST00000554776 GAGE12BA1L429 117 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 GAGE12HA6NDE8 117 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 DRGXA6NNA5 263 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 A6NNZ2 444 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 CTNND1O60716 968 aaKnown RBP3.98□□□□□ -1.77
SCFD1-213ENST00000554776 DTNBO60941 627 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 PPFIA4O75335 1185 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 OFD1O75665 1012 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 ITGB1P05556 798 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 HSPA6P17066 643 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 ATP5JP18859 108 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 RNASE9P60153 205 aaKnown RBP3.98□□□□□ -1.77
SCFD1-213ENST00000554776 CTXN1P60606 82 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 FAM189BP81408 668 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 GALEQ14376 348 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 RAB39AQ14964 217 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 PPP4R3AQ6IN85 833 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 LRRC55Q6ZSA7 311 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 RSPH3Q86UC2 560 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 ZBTB34Q8NCN2 500 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 PPP1R35Q8TAP8 253 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 LARP4BQ92615 738 aaKnown RBP3.98□□□□□ -1.77
SCFD1-213ENST00000554776 PMM1Q92871 262 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 HPS3Q969F9 1004 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 CLPTM1LQ96KA5 538 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 AIFM3Q96NN9 605 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 FAM193BQ96PV7 902 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-213ENST00000554776 TAAR9Q96RI9 348 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 NEU1Q99519 415 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 ACO2Q99798 780 aaKnown RBP3.98□□□□□ -1.77
SCFD1-213ENST00000554776 NMRK2Q9NPI5 230 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 HS3ST4Q9Y661 456 aa3.98□□□□□ -1.77
SCFD1-213ENST00000554776 LRRC14BA6NHZ5 514 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 RNASET2O00584 256 aaKnown RBP3.97□□□□□ -1.77
SCFD1-213ENST00000554776 ZNF185O15231 689 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 NCR1O76036 304 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 POMCP01189 267 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 MYL1P05976 194 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 CHN2P52757 468 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms