RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 GOLGA8RI6L899 631 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 DGAT1O75907 488 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 KLRC1P26715 233 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 SNRPFP62306 86 aaKnown RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 TRAPPC11Q7Z392 1133 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 KIRREL3Q8IZU9 778 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 USP6NLQ92738 828 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 BEGAINQ9BUH8 593 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 TRIM62Q9BVG3 475 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 MTO1Q9Y2Z2 717 aaKnown RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 TAF6LQ9Y6J9 622 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 A8MXQ7 604 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 KCNN4O15554 427 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 MYBP10242 640 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 GNL1P36915 607 aaPredicted RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 STX3Q13277 289 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 MED21Q13503 144 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 TTLL4Q14679 1199 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 STILQ15468 1287 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 TRADDQ15628 312 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 KLHDC7AQ5VTJ3 777 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 LRRC8EQ6NSJ5 796 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 ULK4Q96C45 1275 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 FUT8Q9BYC5 575 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 FLT1P17948 1338 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 LOC102724159A0A0B4J2E5 919 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 SYNDIG1LA6NDD5 238 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 KLK7P49862 253 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 PRAMEP78395 509 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 PWP2Q15269 919 aaKnown RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 DALRD3Q5D0E6 543 aaKnown RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 PID1Q7Z2X4 250 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 LZICQ8WZA0 190 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 TMEM117Q9H0C3 514 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 ARHGAP26Q9UNA1 814 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 F5H423 210 aaPredicted RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 ESRRBO95718 433 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 COMTP21964 271 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 ZNF200P98182 395 aaPredicted RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 SNRNP35Q16560 246 aaKnown RBP14.68□□□□□ -0.06
VTI1B-204ENST00000554659 TMCO5AQ8N6Q1 288 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 PBXIP1Q96AQ6 731 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 LMCD1Q9NZU5 365 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 SEC24DO94855 1032 aaPredicted RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 PLA2G4AP47712 749 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 NFX1Q12986 1120 aaKnown RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 C4orf33Q8N1A6 199 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 CPA5Q8WXQ8 436 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 KCNK16Q96T55 309 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 ZC3H7BQ9UGR2 993 aaKnown RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 PLAGL2Q9UPG8 496 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 ADORA2BP29275 332 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 SEC24CP53992 1094 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 CNGA3Q16281 694 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 SP8Q8IXZ3 490 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 DTNBP1Q96EV8 351 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 ZNF560Q96MR9 790 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 PNKPQ96T60 521 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 ASPSCR1Q9BZE9 553 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 JPH1Q9HDC5 661 aaPredicted RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 SLC40A1Q9NP59 571 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 KLHL11Q9NVR0 708 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 ALG6Q9Y672 507 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 ENO4A6NNW6 628 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 PRLRP16471 622 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 RFX5P48382 616 aaPredicted RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 PTPAQ15257 358 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 TAGAPQ8N103 731 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 TEX12Q9BXU0 123 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 XPO7Q9UIA9 1087 aaKnown RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 C21orf2O43822 256 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 MAGEA4P43358 317 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 LMBRD2Q68DH5 695 aaPredicted RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
VTI1B-204ENST00000554659 WRNIP1Q96S55 665 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 OSBPL8Q9BZF1 889 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 CARD9Q9H257 536 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 SENP2Q9HC62 589 aa14.67□□□□□ -0.06
VTI1B-204ENST00000554659 ZSCAN9O15535 394 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 HSD17B3P37058 310 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 NME3Q13232 169 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 C16orf86Q6ZW13 317 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 COL23A1Q86Y22 540 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 DAGLBQ8NCG7 672 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 DTX3LQ8TDB6 740 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 ASCC2Q9H1I8 757 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 NYAP2Q9P242 653 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 KLHL2O95198 593 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 ERVK-24P63145 666 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 INPP5AQ14642 412 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 POTEAQ6S8J7 498 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 ZNF677Q86XU0 584 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 ARHGEF1Q92888 912 aaKnown RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 MRGBPQ9NV56 204 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 PCDHB2Q9Y5E7 798 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 E5RI56 91 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 IRX1P78414 480 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 SF3B3Q15393 1217 aaKnown RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 RBBP8NLQ8NC74 664 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 DNAJC9Q8WXX5 260 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms