RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CREB1P16220 341 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 MMP13P45452 471 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 ITGA8P53708 1063 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 BACE1P56817 501 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 ACTN3Q08043 901 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 AUHQ13825 339 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 EMC2Q15006 297 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 KYNUQ16719 465 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 DYDC1Q8WWB3 177 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 NTPCRQ9BSD7 190 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 LRRC19Q9H756 370 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 TBK1Q9UHD2 729 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 ATXN2Q99700 1313 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 DNM1LO00429 736 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 FSCN2O14926 492 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 GBP1P32455 592 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 GCNT1Q02742 428 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 TMEM132BQ14DG7 1078 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 ICE2Q659A1 982 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 KAZNQ674X7 775 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 YTHDF3Q7Z739 585 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 CNPY4Q8N129 248 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 ANKRD42Q8N9B4 389 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 FAM212AQ96EL1 285 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 TARS2Q9BW92 718 aaKnown RBP16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
ARHGEF40-203ENST00000554514 KIAA1217Q5T5P2 1943 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 SRRM3A6NNA2 597 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 EXTL3O43909 919 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 GARTP22102 1010 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 GTF2H1P32780 548 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 SP2Q02086 613 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 FSTL1Q12841 308 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 SEPT14Q6ZU15 432 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 ATXN2LQ8WWM7 1075 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 ELAC2Q9BQ52 826 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 HAPLN2Q9GZV7 340 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 KCNK9Q9NPC2 374 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 AAASQ9NRG9 546 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 RBAKQ9NYW8 714 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 PCDHB2Q9Y5E7 798 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 CD2APQ9Y5K6 639 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 AGTP01019 485 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 GNA15P30679 374 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 DSG3P32926 999 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 TAS2R40P59535 323 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 ASAP3Q8TDY4 903 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 SCLT1Q96NL6 688 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 APOBEC3GQ9HC16 384 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 A1CFQ9NQ94 594 aaKnown RBP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 ADAM22Q9P0K1 906 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 GGT7Q9UJ14 662 aa16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.71■□□□□ 0.27
ARHGEF40-203ENST00000554514 THAP12O43422 761 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 ATF2P15336 505 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF394Q53GI3 561 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 MSTO1Q9BUK6 570 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 ARHGAP28Q9P2N2 729 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 CNOT7Q9UIV1 285 aaKnown RBP16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 VNN1O95497 513 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 IBSPP21815 317 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 GMPSP49915 693 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 GTF2A1P52655 376 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 ATP13A4Q4VNC1 1196 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 C12orf50Q8NA57 414 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 SNF8Q96H20 258 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 RUNDC3BQ96NL0 473 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 DCLK3Q9C098 648 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 C17orf75Q9HAS0 396 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 ANAPC5Q9UJX4 755 aa16.7■□□□□ 0.26
ARHGEF40-203ENST00000554514 K7ERI5 159 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 TP73O15350 636 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZACNQ401N2 412 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ANKRD20A8PQ5CZ79 823 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 MIS18BP1Q6P0N0 1132 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ABHD15Q6UXT9 468 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ENOSF1Q7L5Y1 443 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 EXOC3L1Q86VI1 746 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 CCDC197Q8NCU1 140 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 RDM1Q8NG50 284 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 OR5B17Q8NGF7 314 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 GDAP1Q8TB36 358 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ACSF2Q96CM8 615 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 DDX27Q96GQ7 796 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 HAUS2Q9NVX0 235 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 CYP39A1Q9NYL5 469 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 C5orf60A6NFR6 353 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 GAS8O95995 478 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 C4BPAP04003 597 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms