RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ARHGEF3Q9NR81 526 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 SMC3Q9UQE7 1217 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 MAPTP10636 758 aaKnown RBP20.5■□□□□ 0.87
CPSF2-203ENST00000554290 ANGPT1Q15389 498 aa20.5■□□□□ 0.87
CPSF2-203ENST00000554290 VARS2Q5ST30 1063 aaKnown RBP20.5■□□□□ 0.87
CPSF2-203ENST00000554290 SLC8B1Q6J4K2 584 aa20.5■□□□□ 0.87
CPSF2-203ENST00000554290 FGF14Q92915 247 aa20.5■□□□□ 0.87
CPSF2-203ENST00000554290 C18orf25Q96B23 403 aaPredicted RBP20.5■□□□□ 0.87
CPSF2-203ENST00000554290 SHDQ96IW2 340 aa20.5■□□□□ 0.87
CPSF2-203ENST00000554290 DNMT3BQ9UBC3 853 aaKnown RBP20.5■□□□□ 0.87
CPSF2-203ENST00000554290 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.5■□□□□ 0.87
CPSF2-203ENST00000554290 PRRG1O14668 218 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 UBA7P41226 1012 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 MATR3P43243 847 aaKnown RBP eCLIP20.49■□□□□ 0.87
CPSF2-203ENST00000554290 ROR1Q01973 937 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 SLC10A6Q3KNW5 377 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 TMEM119Q4V9L6 283 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 LARP1BQ659C4 914 aaKnown RBP20.49■□□□□ 0.87
CPSF2-203ENST00000554290 ST13P5Q8NFI4 369 aaPredicted RBP20.49■□□□□ 0.87
CPSF2-203ENST00000554290 ITFG1Q8TB96 612 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 BICD1Q96G01 975 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 CALML4Q96GE6 196 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 HCFC1R1Q9NWW0 138 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 ODF2LQ9ULJ1 636 aa20.49■□□□□ 0.87
CPSF2-203ENST00000554290 MRPS23Q9Y3D9 190 aaKnown RBP20.49■□□□□ 0.87
CPSF2-203ENST00000554290 ABLIM3O94929 683 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 CD2BP2O95400 341 aaKnown RBP20.48■□□□□ 0.87
CPSF2-203ENST00000554290 BMP15O95972 392 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 LRG1P02750 347 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 CLTAP09496 248 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 PTPN2P17706 415 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 SCP2P22307 547 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 MCM4P33991 863 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 ARPP19P56211 112 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 GPC5P78333 572 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 MCL1Q07820 350 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 SEZ6Q53EL9 994 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 FRMD5Q7Z6J6 570 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 APPL2Q8NEU8 664 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 NKD2Q969F2 451 aaPredicted RBP20.48■□□□□ 0.87
CPSF2-203ENST00000554290 SUSD3Q96L08 255 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 RPP25Q9BUL9 199 aaKnown RBP20.48■□□□□ 0.87
CPSF2-203ENST00000554290 PLEKHA5Q9HAU0 1116 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 SIT1Q9Y3P8 196 aa20.48■□□□□ 0.87
CPSF2-203ENST00000554290 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.48■□□□□ 0.87
CPSF2-203ENST00000554290 ZFHX2Q9C0A1 2572 aaPredicted RBP20.48■□□□□ 0.87
CPSF2-203ENST00000554290 DOCK8Q8NF50 2099 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 VWA8A3KMH1 1905 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 NPHP3-ACAD11A0A0J9YXS1 232 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 ARHGEF37A1IGU5 675 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 TBC1D4O60343 1298 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 ATF2P15336 505 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 NCKAP1LP55160 1127 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 MRPL58Q14197 206 aaKnown RBP20.47■□□□□ 0.87
CPSF2-203ENST00000554290 KYAT1Q16773 422 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 CTXN3Q4LDR2 81 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 ARSHQ5FYA8 562 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 TPGS2Q68CL5 300 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 ASCL5Q7RTU5 278 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 HAUS6Q7Z4H7 955 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 NPAS3Q8IXF0 933 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 GDE1Q9NZC3 331 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 FBXL5Q9UKA1 691 aa20.47■□□□□ 0.87
CPSF2-203ENST00000554290 WDR27A2RRH5 827 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 PRR23AA6NEV1 266 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 MEFVO15553 781 aaPredicted RBP20.46■□□□□ 0.87
CPSF2-203ENST00000554290 RHOP08100 348 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 MARCKSP29966 332 aaPredicted RBP20.46■□□□□ 0.87
CPSF2-203ENST00000554290 PFKPQ01813 784 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 CACNB1Q02641 598 aaPredicted RBP20.46■□□□□ 0.87
CPSF2-203ENST00000554290 ZNF280DQ6N043 979 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 GPBP1Q86WP2 473 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 TCEAL8Q8IYN2 117 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 ING5Q8WYH8 240 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 TBC1D32Q96NH3 1257 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 CYP4F11Q9HBI6 524 aa20.46■□□□□ 0.87
CPSF2-203ENST00000554290 AVENQ9NQS1 362 aaPredicted RBP20.46■□□□□ 0.87
CPSF2-203ENST00000554290 CXCL8P10145 99 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 LIG4P49917 911 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 STARD6P59095 220 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 SPECC1Q5M775 1068 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 MYCT1Q8N699 235 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 RASSF8Q8NHQ8 419 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 KCNN1Q92952 543 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 REEP2Q9BRK0 252 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 MAFFQ9ULX9 164 aa20.45■□□□□ 0.86
CPSF2-203ENST00000554290 TTC26A0AVF1 554 aa20.44■□□□□ 0.86
CPSF2-203ENST00000554290 ZNF197O14709 1029 aa20.44■□□□□ 0.86
CPSF2-203ENST00000554290 HNRNPDLO14979 420 aaKnown RBP20.44■□□□□ 0.86
CPSF2-203ENST00000554290 XPOTO43592 962 aaKnown RBP20.44■□□□□ 0.86
CPSF2-203ENST00000554290 FAM13AO94988 1023 aa20.44■□□□□ 0.86
CPSF2-203ENST00000554290 KRT18P05783 430 aaKnown RBP20.44■□□□□ 0.86
CPSF2-203ENST00000554290 DCNP07585 359 aaKnown RBP20.44■□□□□ 0.86
CPSF2-203ENST00000554290 LONP1P36776 959 aaKnown RBP20.44■□□□□ 0.86
CPSF2-203ENST00000554290 PRKCQQ04759 706 aa20.44■□□□□ 0.86
CPSF2-203ENST00000554290 PPP2R3AQ06190 1150 aa20.44■□□□□ 0.86
CPSF2-203ENST00000554290 SNW1Q13573 536 aaKnown RBP20.44■□□□□ 0.86
CPSF2-203ENST00000554290 DHX8Q14562 1220 aaKnown RBP20.44■□□□□ 0.86
CPSF2-203ENST00000554290 ELMOD1Q8N336 334 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms