RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 MTMR1Q13613 665 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 PTPN14Q15678 1187 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 DUOXA2Q1HG44 320 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 KIZQ2M2Z5 673 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 UVSSAQ2YD98 709 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 HGSNATQ68CP4 663 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 ZBTB44Q8NCP5 570 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 CMASQ8NFW8 434 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SMARCC2Q8TAQ2 1214 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 STAMQ92783 540 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 CUL5Q93034 780 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 CCDC97Q96F63 343 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 IGSF21Q96ID5 467 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SHDQ96IW2 340 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 KLHL5Q96PQ7 755 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 OSMRQ99650 979 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 UBAC1Q9BSL1 405 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 BCO2Q9BYV7 579 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 CEP41Q9BYV8 373 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 RHOBTB2Q9BYZ6 727 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 FOXQ1Q9C009 403 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 PARD6AQ9NPB6 346 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 JADE2Q9NQC1 790 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SLC2A4RGQ9NR83 387 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 PCMTD2Q9NV79 361 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SPATA6Q9NWH7 488 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 ZSCAN32Q9NX65 697 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SLC9A2Q9UBY0 812 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SMG5Q9UPR3 1016 aaKnown RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 UBIAD1Q9Y5Z9 338 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 FANCMQ8IYD8 2048 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 A0A0U1RQF3 1178 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 KANSL1LA0AUZ9 987 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 CARNS1A5YM72 827 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 ANHXE9PGG2 379 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 DHX15O43143 795 aaKnown RBP7.79□□□□□ -1.16
ATXN3-224ENST00000554040 LRRN2O75325 713 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 GALTP07902 379 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 KLRC2P26717 231 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 EIF1AXP47813 144 aaKnown RBP7.79□□□□□ -1.16
ATXN3-224ENST00000554040 DMWDQ09019 674 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 GRM4Q14833 912 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 SEC23AQ15436 765 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 CYP26C1Q6V0L0 522 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 TMEM173Q86WV6 379 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-224ENST00000554040 TRIM42Q8IWZ5 723 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 RNF169Q8NCN4 708 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 NETO1Q8TDF5 533 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 NELL1Q92832 810 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 UTP4Q969X6 686 aaKnown RBP7.79□□□□□ -1.16
ATXN3-224ENST00000554040 MYRFLQ96LU7 910 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 MYADMQ96S97 322 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 EMILIN2Q9BXX0 1053 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 MRPL9Q9BYD2 267 aaKnown RBP7.79□□□□□ -1.16
ATXN3-224ENST00000554040 KRT23Q9C075 422 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 ANGPTL2Q9UKU9 493 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 SOX13Q9UN79 622 aa7.79□□□□□ -1.16
ATXN3-224ENST00000554040 SALL3Q9BXA9 1300 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 FLNBO75369 2602 aaKnown RBP7.78□□□□□ -1.16
ATXN3-224ENST00000554040 IGKV6D-21A0A0A0MT36 114 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 CCDC195A0A1B0GUA6 201 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 GSC2O15499 205 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 CNPP09543 421 aaKnown RBP7.78□□□□□ -1.16
ATXN3-224ENST00000554040 LAMP2P13473 410 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 CES1P23141 567 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 MZF1P28698 734 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-224ENST00000554040 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
ATXN3-224ENST00000554040 ACTR2P61160 394 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 WTAPQ15007 396 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 ZNF484Q5JVG2 852 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 PIBF1Q8WXW3 757 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 RSPH1Q8WYR4 309 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 PPP1R16BQ96T49 567 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 DDX23Q9BUQ8 820 aaKnown RBP7.78□□□□□ -1.16
ATXN3-224ENST00000554040 OSBPL6Q9BZF3 934 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 CNNM2Q9H8M5 875 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.78□□□□□ -1.16
ATXN3-224ENST00000554040 GMEB2Q9UKD1 530 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 F5P12259 2224 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 CLUHO75153 1309 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 NFASCO94856 1347 aa7.78□□□□□ -1.16
ATXN3-224ENST00000554040 SMG1Q96Q15 3661 aaKnown RBP7.77□□□□□ -1.16
ATXN3-224ENST00000554040 COL1A2P08123 1366 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 HMX2A2RU54 273 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 PRR19A6NJB7 356 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 FAM170BA6NMN3 283 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 PDE2AO00408 941 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-224ENST00000554040 ZC3H11AO75152 810 aaKnown RBP eCLIP7.77□□□□□ -1.17
ATXN3-224ENST00000554040 VTNP04004 478 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 RPLP1P05386 114 aaKnown RBP7.77□□□□□ -1.17
ATXN3-224ENST00000554040 PMLP29590 882 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 MAGEA9P43362 315 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 PREPP48147 710 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 GPC5P78333 572 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 SHC2P98077 582 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 TROAPQ12815 778 aa7.77□□□□□ -1.17
ATXN3-224ENST00000554040 SNW1Q13573 536 aaKnown RBP7.77□□□□□ -1.17
ATXN3-224ENST00000554040 HTR4Q13639 388 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms