RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ELANEP08246 267 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 CKBP12277 381 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 SLC6A2P23975 617 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 HSD11B2P80365 405 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 DACT2Q5SW24 774 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 RHOT1Q8IXI2 618 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 SLC44A3Q8N4M1 653 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 NLGN4YQ8NFZ3 816 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-210ENST00000553693 OR2I1PQ8NGU4 316 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 NUP133Q8WUM0 1156 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 NRG4Q8WWG1 115 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 SLC2A13Q96QE2 648 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 MED15Q96RN5 788 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 PNKPQ96T60 521 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 C11orf54Q9H0W9 315 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-210ENST00000553693 INTUQ9ULD6 942 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 ATP8A1Q9Y2Q0 1164 aa5.39□□□□□ -1.55
SCFD1-210ENST00000553693 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
SCFD1-210ENST00000553693 MYBBP1AQ9BQG0 1328 aaKnown RBP5.39□□□□□ -1.55
SCFD1-210ENST00000553693 KIAA0355O15063 1070 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 ERN1O75460 977 aaKnown RBP5.38□□□□□ -1.55
SCFD1-210ENST00000553693 AMY1AP04745 511 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
SCFD1-210ENST00000553693 CXCR5P32302 372 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 CTXN1P60606 82 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 ATP8B2P98198 1209 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 PGM2L1Q6PCE3 622 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 RSPH3Q86UC2 560 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 ADGRG3Q86Y34 549 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 COLGALT2Q8IYK4 626 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 HDAC10Q969S8 669 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 MYOCQ99972 504 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 SYNPO2LQ9H987 977 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 MKS1Q9NXB0 559 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 USP25Q9UHP3 1055 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 INSL6Q9Y581 213 aa5.38□□□□□ -1.55
SCFD1-210ENST00000553693 CDHR4A6H8M9 788 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 KIAA0391O15091 583 aaKnown RBP5.37□□□□□ -1.55
SCFD1-210ENST00000553693 HAUS5O94927 633 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 IARSP41252 1262 aaKnown RBP5.37□□□□□ -1.55
SCFD1-210ENST00000553693 CDC42EP1Q00587 391 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 SCAPQ12770 1279 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 FOXI1Q12951 378 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 ACAP2Q15057 778 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 GPR149Q86SP6 731 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 ZGPATQ8N5A5 531 aaKnown RBP5.37□□□□□ -1.55
SCFD1-210ENST00000553693 PPM1NQ8N819 430 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 C1orf162Q8NEQ5 155 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-210ENST00000553693 DPF2Q92785 391 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 Q96MF0 132 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 CASS4Q9NQ75 786 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 TDP1Q9NUW8 608 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 DMTF1Q9Y222 760 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 MRFAP1Q9Y605 127 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 AATKQ6ZMQ8 1374 aa5.37□□□□□ -1.55
SCFD1-210ENST00000553693 TCRBV7S2A1N4TA0A589 114 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 MYADML2A6NDP7 307 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 SGTAO43765 313 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 NDUFS2O75306 463 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 MTHFD1P11586 935 aaKnown RBP5.36□□□□□ -1.55
SCFD1-210ENST00000553693 VAV2P52735 878 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 INAVAQ3KP66 663 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 PRR16Q569H4 304 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 SYDE2Q5VT97 1194 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 Q6ZNX1 250 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 CBARPQ8N350 705 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-210ENST00000553693 TBC1D15Q8TC07 691 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 JADE3Q92613 823 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 NELL1Q92832 810 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 TMX3Q96JJ7 454 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 GSTO2Q9H4Y5 243 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 PTGFRNQ9P2B2 879 aa5.36□□□□□ -1.55
SCFD1-210ENST00000553693 KLHL33A6NCF5 533 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 PRSS23O95084 383 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 MT-CO1P00395 513 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 LMO1P25800 156 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 MPLP40238 635 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 NOMO3P69849 1222 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 KRT85P78386 507 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 CYP2A13Q16696 494 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 NOMO2Q5JPE7 1267 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 PPP4R3AQ6IN85 833 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 CAGE1Q8TC20 777 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 MARS2Q96GW9 593 aaKnown RBP5.35□□□□□ -1.55
SCFD1-210ENST00000553693 ZNF764Q96H86 408 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-210ENST00000553693 LRIT1Q9P2V4 623 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 TUBD1Q9UJT1 453 aa5.35□□□□□ -1.55
SCFD1-210ENST00000553693 TRGV11A0A075B6L2 103 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 XPOTO43592 962 aaKnown RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 RPLP2P05387 115 aaKnown RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 MYBL2P10244 700 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 C5AR1P21730 350 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 CLK3P49761 638 aaKnown RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 MRPS35P82673 323 aaKnown RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 SLFN5Q08AF3 891 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 TARDBPQ13148 414 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 RAB39AQ14964 217 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 ABCB5Q2M3G0 1257 aa5.34□□□□□ -1.55
SCFD1-210ENST00000553693 PABPC1LQ4VXU2 614 aaKnown RBP5.34□□□□□ -1.55
SCFD1-210ENST00000553693 SYCE2Q6PIF2 218 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms