RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZSCAN18Q8TBC5 510 aaPredicted RBP15.3■□□□□ 0.04
PRPF39-204ENST00000553605 FAM200AQ8TCP9 573 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 E2F7Q96AV8 911 aa15.3■□□□□ 0.04
PRPF39-204ENST00000553605 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
PRPF39-204ENST00000553605 NCANO14594 1321 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 MYBPHLA2RUH7 354 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 CHADO15335 359 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 EXTL3O43909 919 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 MOSPD3O75425 235 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 AKAP3O75969 853 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 B3GAT3O94766 335 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 ABLIM3O94929 683 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 IGFBP6P24592 240 aaPredicted RBP15.29■□□□□ 0.04
PRPF39-204ENST00000553605 TKTP29401 623 aaKnown RBP15.29■□□□□ 0.04
PRPF39-204ENST00000553605 RBM25P49756 843 aaKnown RBP15.29■□□□□ 0.04
PRPF39-204ENST00000553605 RCAN1P53805 252 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 ROR1Q01973 937 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 CCINQ13939 588 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 IQCEQ6IPM2 695 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 DHX32Q7L7V1 743 aaKnown RBP15.29■□□□□ 0.04
PRPF39-204ENST00000553605 RALGPS2Q86X27 583 aaPredicted RBP15.29■□□□□ 0.04
PRPF39-204ENST00000553605 C4orf19Q8IY42 314 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 HS6ST3Q8IZP7 471 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 DDX27Q96GQ7 796 aaKnown RBP15.29■□□□□ 0.04
PRPF39-204ENST00000553605 CXCL16Q9H2A7 254 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 CYP4F11Q9HBI6 524 aa15.29■□□□□ 0.04
PRPF39-204ENST00000553605 SPAG17Q6Q759 2223 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 GCN1Q92616 2671 aaKnown RBP15.28■□□□□ 0.04
PRPF39-204ENST00000553605 TMEM189-UBE2V1I3L0A0 370 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 ATF2P15336 505 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 GJA1P17302 382 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 CTHP32929 405 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
PRPF39-204ENST00000553605 PPP2R5CQ13362 524 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 CAPSQ13938 189 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 PON2Q15165 354 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 SLC8B1Q6J4K2 584 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 TCEAL8Q8IYN2 117 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 ELMOD1Q8N336 334 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 TTC8Q8TAM2 541 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 ZNF512Q96ME7 567 aaPredicted RBP15.28■□□□□ 0.04
PRPF39-204ENST00000553605 NFKBIZQ9BYH8 718 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 C22orf23Q9BZE7 217 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 SNTG2Q9NY99 539 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 VPS54Q9P1Q0 977 aa15.28■□□□□ 0.04
PRPF39-204ENST00000553605 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.04
PRPF39-204ENST00000553605 ZBTB39O15060 712 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 TRAPPC3O43617 180 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 SEC24AO95486 1093 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 MYL4P12829 197 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 CSRP1P21291 193 aaKnown RBP15.27■□□□□ 0.04
PRPF39-204ENST00000553605 ARPP19P56211 112 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 NLRP5P59047 1200 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 FCHO2Q0JRZ9 810 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 PLK5Q496M5 336 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 SOWAHCQ53LP3 525 aaPredicted RBP15.27■□□□□ 0.04
PRPF39-204ENST00000553605 ASAP3Q8TDY4 903 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 RSPRY1Q96DX4 576 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 LXNQ9BS40 222 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 GPR88Q9GZN0 384 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 DDX25Q9UHL0 483 aaKnown RBP15.27■□□□□ 0.04
PRPF39-204ENST00000553605 VAV3Q9UKW4 847 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 NEUROG3Q9Y4Z2 214 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 INSL5Q9Y5Q6 135 aa15.27■□□□□ 0.04
PRPF39-204ENST00000553605 I3L4J1 428 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 RECQL4O94761 1208 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 ZIC2O95409 532 aaPredicted RBP15.26■□□□□ 0.03
PRPF39-204ENST00000553605 CAVIN2O95810 425 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 ARL2P36404 184 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 CLCNKBP51801 687 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 CREB5Q02930 508 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 TEAD2Q15562 447 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 MOXD1Q6UVY6 613 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 CD300LGQ6UXG3 332 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 LEMD2Q8NC56 503 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 DUSP15Q9H1R2 295 aaPredicted RBP15.26■□□□□ 0.03
PRPF39-204ENST00000553605 SLITRK6Q9H5Y7 841 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 GTSE1Q9NYZ3 720 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 RGL1Q9NZL6 768 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 SLC8A2Q9UPR5 921 aa15.26■□□□□ 0.03
PRPF39-204ENST00000553605 LNP1A1A4G5 178 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 RHOBTB1O94844 696 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 GLRA2P23416 452 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 EPHA5P54756 1037 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 EPHA7Q15375 998 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 ELF2Q15723 593 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 RNF20Q5VTR2 975 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
PRPF39-204ENST00000553605 KIAA1211LQ6NV74 962 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 PKN3Q6P5Z2 889 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 ZSWIM4Q9H7M6 989 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 ASAH2Q9NR71 780 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 CEP72Q9P209 647 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 MSRB2Q9Y3D2 182 aa15.25■□□□□ 0.03
PRPF39-204ENST00000553605 LOC400499M0QZD8 3231 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 ITPR1Q14643 2758 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 BCLAF3A2AJT9 711 aaKnown RBP15.24■□□□□ 0.03
PRPF39-204ENST00000553605 TBX3O15119 743 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms