RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 IFIT5Q13325 482 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 MINDY4Q4G0A6 757 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 CYB5D1Q6P9G0 228 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 FCHSD1Q86WN1 690 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 GALNT6Q8NCL4 622 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 LRRC46Q96FV0 321 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 FAM227BQ96M60 508 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 GSDMAQ96QA5 445 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 RIOK1Q9BRS2 568 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 KATNAL1Q9BW62 490 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 PCIF1Q9H4Z3 704 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 GREM2Q9H772 168 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 SRA1Q9HD15 236 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 IL1RAPL2Q9NP60 686 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 SUCLA2Q9P2R7 463 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 ATXN10Q9UBB4 475 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 GGA1Q9UJY5 639 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 PCDHA4Q9UN74 947 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TMED5Q9Y3A6 229 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 PCDHA9Q9Y5H5 950 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 FAM205AQ6ZU69 1335 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 MEFVO15553 781 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 CTDNEP1O95476 244 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 CELA2BP08218 269 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 SLURP2P0DP57 97 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 ZSCAN22P10073 491 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 HOXC13P31276 330 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 GNGT1P63211 74 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 ZNF267Q14586 743 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 ME3Q16798 604 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TMEM266Q2M3C6 531 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 NUGGCQ68CJ6 796 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 HEATR6Q6AI08 1181 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 TLDC1Q6P9B6 456 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 C4orf50Q6ZRC1 276 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 LHFPL2Q6ZUX7 228 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TTC6Q86TZ1 520 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 SPATS2Q86XZ4 545 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 SMC1BQ8NDV3 1235 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 SLC35B4Q969S0 331 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 GFM2Q969S9 779 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 STAMBPL1Q96FJ0 436 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 NAF1Q96HR8 494 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 RPGRIP1Q96KN7 1286 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 STRBPQ96SI9 672 aaKnown RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 DHRS4Q9BTZ2 278 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 VPS33BQ9H267 617 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 PCDH18Q9HCL0 1135 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 VCX3AQ9NNX9 186 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 CATSPERZQ9NTU4 200 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 SEPT10Q9P0V9 454 aa4.31□□□□□ -1.72
RDH11-204ENST00000553578 TRPC5Q9UL62 973 aaPredicted RBP4.31□□□□□ -1.72
RDH11-204ENST00000553578 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 LRRIQ3A6PVS8 624 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 TEX28O15482 410 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 MGEA5O60502 916 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 DDHD2O94830 711 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 FSBPO95073 299 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 KCNH1O95259 989 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CYP1A2P05177 515 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 EDN3P14138 238 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 DDX5P17844 614 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 ALDH3A1P30838 453 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 PCK1P35558 622 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 EFR3AQ14156 821 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 UBAP2LQ14157 1087 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 BTG3Q14201 252 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 NTRK3Q16288 839 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 HSP90AA5PQ58FG0 334 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 C6orf183Q5T699 404 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CCDC144CPQ8IYA2 1237 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 GSDMBQ8TAX9 411 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CCDC110Q8TBZ0 833 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 OSBP2Q969R2 916 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CLMNQ96JQ2 1002 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 LNPEPQ9UIQ6 1025 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.3□□□□□ -1.72
RDH11-204ENST00000553578 SH3GLB1Q9Y371 365 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 PCDHGB2Q9Y5G2 931 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CYP46A1Q9Y6A2 500 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CCDC151A5D8V7 595 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 TMEM221A6NGB7 291 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 RHPN2P1A8MT19 583 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 PRODHO43272 600 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ORC4O43929 436 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 TADA3O75528 432 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 DNAJC8O75937 253 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 SYT1P21579 422 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 POLR2BP30876 1174 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 SLC16A2P36021 539 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 STAT3P40763 770 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CETN2P41208 172 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 KPNA1P52294 538 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 IFFO1Q0D2I5 559 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 RESTQ13127 1097 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 SIM2Q14190 667 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 PSMD6Q15008 389 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 EMC10Q5UCC4 262 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms