RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CNTN3Q9P232 1028 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 SOWAHDA6NJG2 315 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 ESPNB1AK53 854 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 TDRD15B5MCY1 1934 aaKnown RBP14.81□□□□□ -0.04
APEX1-205ENST00000553555 ZNF623O75123 536 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 STAT1P42224 750 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 KCNJ6P48051 423 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 MFAP3P55082 362 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 TRPC3Q13507 836 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 ZBTB6Q15916 424 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 RAD9BQ6WBX8 426 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 IRF2BP2Q7Z5L9 587 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 PPM1KQ8N3J5 372 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 C1orf127Q8N9H9 656 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 CXorf38Q8TB03 319 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 KAT5Q92993 513 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 ELMO3Q96BJ8 720 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 FAM81BQ96LP2 452 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 KREMEN1Q96MU8 473 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 ZMAT2Q96NC0 199 aaKnown RBP14.81□□□□□ -0.04
APEX1-205ENST00000553555 TSPAN18Q96SJ8 248 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 ADAM2Q99965 735 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 MCOLN1Q9GZU1 580 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 KLK14Q9P0G3 267 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 SIX4Q9UIU6 781 aa14.81□□□□□ -0.04
APEX1-205ENST00000553555 A0A0U1RQF3 1178 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 F8VZ95 297 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 FOXN3O00409 490 aaPredicted RBP14.8□□□□□ -0.04
APEX1-205ENST00000553555 NBNO60934 754 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 ASS1P00966 412 aaKnown RBP14.8□□□□□ -0.04
APEX1-205ENST00000553555 ITGA4P13612 1032 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 KCNE1P15382 129 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 MSNP26038 577 aaKnown RBP14.8□□□□□ -0.04
APEX1-205ENST00000553555 SOX5P35711 763 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 RAB27AP51159 221 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 MYL6P60660 151 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 GCNT1Q02742 428 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 MTF1Q14872 753 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 GPNMBQ14956 572 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 ASIC2Q16515 512 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 SGSM1Q2NKQ1 1148 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 HGSNATQ68CP4 663 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 SPOPLQ6IQ16 392 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 RTN4RL1Q86UN2 441 aaPredicted RBP14.8□□□□□ -0.04
APEX1-205ENST00000553555 HACE1Q8IYU2 909 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 IFIH1Q9BYX4 1025 aaKnown RBP14.8□□□□□ -0.04
APEX1-205ENST00000553555 APOBEC3GQ9HC16 384 aaKnown RBP14.8□□□□□ -0.04
APEX1-205ENST00000553555 RGS18Q9NS28 235 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 C1orf112Q9NSG2 853 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 DPP3Q9NY33 737 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 ARHGAP20Q9P2F6 1191 aa14.8□□□□□ -0.04
APEX1-205ENST00000553555 UMODL1Q5DID0 1318 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 SMIM28A0A1B0GU29 152 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 ITGB3P05106 788 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 SERPING1P05155 500 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 SKIP12755 728 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 ENOSF1Q7L5Y1 443 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 TMEM130Q8N3G9 435 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 TAF4BQ92750 862 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 IMPG2Q9BZV3 1241 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 NHEJ1Q9H9Q4 299 aaPredicted RBP14.79□□□□□ -0.04
APEX1-205ENST00000553555 ITGA11Q9UKX5 1188 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 ATP11BQ9Y2G3 1177 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 GIT1Q9Y2X7 761 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 NUB1Q9Y5A7 615 aa14.79□□□□□ -0.04
APEX1-205ENST00000553555 MEIS3P2A8K0S8 358 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 KRT19P08727 400 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 PNMA6AP0CW24 399 aaPredicted RBP14.78□□□□□ -0.04
APEX1-205ENST00000553555 FERP16591 822 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 PRKCIP41743 596 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 GUCY2FP51841 1108 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 NOP14P78316 857 aaKnown RBP14.78□□□□□ -0.04
APEX1-205ENST00000553555 ARID5AQ03989 594 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 PLEKHG4Q58EX7 1191 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 AGMOQ6ZNB7 445 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 FAM43BQ6ZT52 329 aaPredicted RBP14.78□□□□□ -0.04
APEX1-205ENST00000553555 NECAB2Q7Z6G3 386 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 GPIHBP1Q8IV16 184 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 FMNL3Q8IVF7 1028 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 CCDC170Q8IYT3 715 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 BEST2Q8NFU1 509 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 SHC3Q92529 594 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 FTHL17Q9BXU8 183 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 XYLT2Q9H1B5 865 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 HIPK3Q9H422 1215 aa14.78□□□□□ -0.04
APEX1-205ENST00000553555 UBQLN1Q9UMX0 589 aaKnown RBP14.78□□□□□ -0.04
APEX1-205ENST00000553555 EPN1Q9Y6I3 576 aaPredicted RBP14.78□□□□□ -0.04
APEX1-205ENST00000553555 SSU72P8A0A1W2PR75 194 aa14.77□□□□□ -0.04
APEX1-205ENST00000553555 GFPT2O94808 682 aa14.77□□□□□ -0.04
APEX1-205ENST00000553555 PARNO95453 639 aaKnown RBP14.77□□□□□ -0.04
APEX1-205ENST00000553555 PLEKP08567 350 aaPredicted RBP14.77□□□□□ -0.04
APEX1-205ENST00000553555 ATF7P17544 494 aaPredicted RBP14.77□□□□□ -0.04
APEX1-205ENST00000553555 ATICP31939 592 aa14.77□□□□□ -0.04
APEX1-205ENST00000553555 EIF4A3P38919 411 aaKnown RBP14.77□□□□□ -0.04
APEX1-205ENST00000553555 RBP5P82980 135 aa14.77□□□□□ -0.04
APEX1-205ENST00000553555 KLHL30Q0D2K2 578 aa14.77□□□□□ -0.04
APEX1-205ENST00000553555 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.04
APEX1-205ENST00000553555 CUL2Q13617 745 aa14.77□□□□□ -0.04
APEX1-205ENST00000553555 LRRC26Q2I0M4 334 aa14.77□□□□□ -0.04
APEX1-205ENST00000553555 GLRA4Q5JXX5 417 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms