RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
SHMT2-205ENST00000553474 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 ATP8A1Q9Y2Q0 1164 aa13.81□□□□□ -0.2
SHMT2-205ENST00000553474 CYP1A1P04798 512 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-205ENST00000553474 PYGMP11217 842 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 KRT5P13647 590 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 MAPK4P31152 587 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 HMGCS2P54868 508 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 GUCY1A3Q02108 690 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 ADCY2Q08462 1091 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 ODF2Q5BJF6 829 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 SH3D19Q5HYK7 790 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 LDLRAD1Q5T700 205 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 TAS1R3Q7RTX0 852 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 CCDC105Q8IYK2 499 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 MCOLN2Q8IZK6 566 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 GRK7Q8WTQ7 553 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 SLC7A3Q8WY07 619 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 TLCD1Q96CP7 247 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 OPTNQ96CV9 577 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 C18orf8Q96DM3 657 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 WNK4Q96J92 1243 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 POP1Q99575 1024 aaKnown RBP13.8□□□□□ -0.2
SHMT2-205ENST00000553474 TMEM134Q9H6X4 195 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 MRPL47Q9HD33 250 aaKnown RBP13.8□□□□□ -0.2
SHMT2-205ENST00000553474 ZNF302Q9NR11 478 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 AGO2Q9UKV8 859 aaKnown RBP13.8□□□□□ -0.2
SHMT2-205ENST00000553474 FAM169AQ9Y6X4 670 aa13.8□□□□□ -0.2
SHMT2-205ENST00000553474 IGKV6D-21A0A0A0MT36 114 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 TMEM110-MUSTN1A8MSY1 372 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 ECEL1O95672 775 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 CPP00450 1065 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 C4BPAP04003 597 aaKnown RBP13.79□□□□□ -0.2
SHMT2-205ENST00000553474 OATP04181 439 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 RARGP13631 454 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 NSFP46459 744 aaKnown RBP13.79□□□□□ -0.2
SHMT2-205ENST00000553474 PLTPP55058 493 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 CAV1Q03135 178 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 CALCOCO2Q13137 446 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 C6orf118Q5T5N4 469 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 LIN9Q5TKA1 542 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 ZDHHC24Q6UX98 284 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 SAPCD2Q86UD0 394 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 NLRP14Q86W24 1093 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 EXOC8Q8IYI6 725 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 C10orf67Q8IYJ2 551 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 FBXO25Q8TCJ0 367 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 ART4Q93070 314 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 CENPHQ9H3R5 247 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 WHRNQ9P202 907 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 CNTN6Q9UQ52 1028 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 TLL2Q9Y6L7 1015 aa13.79□□□□□ -0.2
SHMT2-205ENST00000553474 K7ERI5 159 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TRAPPC3O43617 180 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TNNI1P19237 187 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ARL2P36404 184 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 MARCKSL1P49006 195 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 APLP1P51693 650 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ZNF157P51786 506 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 SIX1Q15475 284 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TRMT10CQ7L0Y3 403 aaKnown RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ADAT2Q7Z6V5 191 aaKnown RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 MYCBPAPQ8TBZ2 947 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TATDN2Q93075 761 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 CEP89Q96ST8 783 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TRIM31Q9BZY9 425 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 SCINQ9Y6U3 715 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 A0A0G2JMZ2 1700 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 GMNCA6NCL1 334 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 SPDYE16A6NNV3 312 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ATMINO43313 823 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 PSTPIP1O43586 416 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 GAS2O43903 313 aaKnown RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 KIAA0754O94854 1291 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 HLA-DRAP01903 254 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TGFB3P10600 412 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 ITIH2P19823 946 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 HPDP32754 393 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 MTERF2Q49AM1 385 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TRMT1LQ7Z2T5 733 aaKnown RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 TADA2BQ86TJ2 420 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 DEPTORQ8TB45 409 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 CCT8L2Q96SF2 557 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 NRBP2Q9NSY0 501 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 NOVA2Q9UNW9 492 aaKnown RBP13.78□□□□□ -0.2
SHMT2-205ENST00000553474 AFG3L2Q9Y4W6 797 aa13.78□□□□□ -0.2
SHMT2-205ENST00000553474 A0A0B4J269 797 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 GAS8O95995 478 aa13.77□□□□□ -0.21
SHMT2-205ENST00000553474 AGTP01019 485 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms