RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 STRN3Q13033 797 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 SLC5A9Q2M3M2 681 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 SLC10A6Q3KNW5 377 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 SLC44A4Q53GD3 710 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 MTSS1LQ765P7 747 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 ZNF461Q8TAF7 563 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 PLA2G2FQ9BZM2 168 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 CYP4F11Q9HBI6 524 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 DLGAP2Q9P1A6 1054 aa12.55□□□□□ -0.4
NEK3-204ENST00000552973 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
NEK3-204ENST00000552973 KANSL1LA0AUZ9 987 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 H3BQV1 296 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 SEC24AO95486 1093 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 PLA2G4BP0C869 781 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 PLS3P13797 630 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 CEBPBP17676 345 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 PTPN2P17706 415 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 GUCY2CP25092 1073 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 GJB2P29033 226 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 RPL9P32969 192 aaKnown RBP12.54□□□□□ -0.4
NEK3-204ENST00000552973 MCM4P33991 863 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 STARD6P59095 220 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 ATP2C1P98194 919 aaPredicted RBP12.54□□□□□ -0.4
NEK3-204ENST00000552973 DHX8Q14562 1220 aaKnown RBP12.54□□□□□ -0.4
NEK3-204ENST00000552973 UBXN2BQ14CS0 331 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 MLF2Q15773 248 aaPredicted RBP12.54□□□□□ -0.4
NEK3-204ENST00000552973 CTXN3Q4LDR2 81 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 RILPL1Q5EBL4 403 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 SLC8B1Q6J4K2 584 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 C1orf210Q8IVY1 113 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
NEK3-204ENST00000552973 TMEM161BQ8NDZ6 487 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 PJA1Q8NG27 643 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 SPIRE2Q8WWL2 714 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 TCEAL4Q96EI5 215 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 SHDQ96IW2 340 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 NTPCRQ9BSD7 190 aaKnown RBP12.54□□□□□ -0.4
NEK3-204ENST00000552973 C17orf75Q9HAS0 396 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 CNTN3Q9P232 1028 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 TUBGCP4Q9UGJ1 667 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 FBXL5Q9UKA1 691 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 KCNH3Q9ULD8 1083 aa12.54□□□□□ -0.4
NEK3-204ENST00000552973 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 H7C4K7 107 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 SYN3O14994 580 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 CLDN3O15551 220 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 TOM1L1O75674 476 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 ABLIM3O94929 683 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
NEK3-204ENST00000552973 POU2F2P09086 479 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 SP9P0CG40 484 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 CXCL8P10145 99 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
NEK3-204ENST00000552973 ATF2P15336 505 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 SMTNP53814 917 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 SLC12A3P55017 1021 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 MRPL58Q14197 206 aaKnown RBP12.53□□□□□ -0.4
NEK3-204ENST00000552973 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK3-204ENST00000552973 TANGO2Q6ICL3 276 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 HS6ST3Q8IZP7 471 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 DDX12PQ92771 950 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 BICD1Q96G01 975 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 TIPINQ9BVW5 301 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 HAPLN2Q9GZV7 340 aa12.53□□□□□ -0.4
NEK3-204ENST00000552973 TIMM13Q9Y5L4 95 aaPredicted RBP12.53□□□□□ -0.4
NEK3-204ENST00000552973 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 NRG2O14511 850 aaPredicted RBP12.52□□□□□ -0.41
NEK3-204ENST00000552973 LMNAP02545 664 aaKnown RBP12.52□□□□□ -0.41
NEK3-204ENST00000552973 GJA1P17302 382 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 MARCKSP29966 332 aaPredicted RBP12.52□□□□□ -0.41
NEK3-204ENST00000552973 TNFSF9P41273 254 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 CCR2P41597 374 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 GUCY2FP51841 1108 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 ADCY1Q08828 1119 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 RABEP1Q15276 862 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 ARSHQ5FYA8 562 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 HYIQ5T013 277 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 RTL10Q7L3V2 364 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 SUSD3Q96L08 255 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 SPATA6Q9NWH7 488 aaPredicted RBP12.52□□□□□ -0.41
NEK3-204ENST00000552973 DAXXQ9UER7 740 aaPredicted RBP12.52□□□□□ -0.41
NEK3-204ENST00000552973 KIF3AQ9Y496 699 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 INSL5Q9Y5Q6 135 aa12.52□□□□□ -0.41
NEK3-204ENST00000552973 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 ECI2O75521 394 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 OR4Q2P0C623 313 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 MYL4P12829 197 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 CPB1P15086 417 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 PFKPQ01813 784 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 PRKCQQ04759 706 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 MCL1Q07820 350 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 TWF1Q12792 350 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 GRM2Q14416 872 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms