RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CEP68Q76N32 757 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 CDR2LQ86X02 465 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 MFSD6LQ8IWD5 586 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 SMARCD2Q92925 531 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 ESYT1Q9BSJ8 1104 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 TRIM6Q9C030 488 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 RBM12Q9NTZ6 932 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 PARP2Q9UGN5 583 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 CDY1Q9Y6F8 540 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 TMEM8BA6NDV4 472 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 SRRM3A6NNA2 597 aaPredicted RBP12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 ZBTB39O15060 712 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 CDC45O75419 566 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 ARL2P36404 184 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 CAPSQ13938 189 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 CCDC6Q16204 474 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 Q6ZS52 159 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 ASAP3Q8TDY4 903 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 GATA6Q92908 595 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 COL26A1Q96A83 441 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 MSANTD3Q96H12 275 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 MTRQ99707 1265 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 KCNMB3Q9NPA1 279 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 SH3GLB2Q9NR46 395 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 VPS54Q9P1Q0 977 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 NUP205Q92621 2012 aa12.59□□□□□ -0.39
SUPT16H-202ENST00000552829 CCDC163A0A0D9SF12 145 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 ZNF197O14709 1029 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 SLC37A4O43826 429 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 THP07101 528 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 VIPR2P41587 438 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 TFDP1Q14186 410 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 LRRC32Q14392 662 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 EPHA7Q15375 998 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 NPY5RQ15761 445 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 E2F4Q16254 413 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 XKR9Q5GH70 373 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 DGKKQ5KSL6 1271 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 SLC8B1Q6J4K2 584 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 PSAPL1Q6NUJ1 521 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 C1orf228Q6PIY5 440 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 KBTBD6Q86V97 674 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 TCEAL8Q8IYN2 117 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 ZNF461Q8TAF7 563 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 GAB3Q8WWW8 586 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 FAM20AQ96MK3 541 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 CORO1BQ9BR76 489 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 LXNQ9BS40 222 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 RNF26Q9BY78 433 aaPredicted RBP12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 RGL1Q9NZL6 768 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 KIF26AQ9ULI4 1882 aaPredicted RBP12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 PCDHGA5Q9Y5G8 931 aa12.58□□□□□ -0.4
SUPT16H-202ENST00000552829 GIPC1O14908 333 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 ZNF263O14978 683 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 SEC24AO95486 1093 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 GLRA2P23416 452 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 TKTP29401 623 aaKnown RBP12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 EPHA5P54756 1037 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 ROR1Q01973 937 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 CCINQ13939 588 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 TXNDC11Q6PKC3 985 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 ANKS3Q6ZW76 656 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 OTUD6AQ7L8S5 288 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 CACNA2D4Q7Z3S7 1137 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 ABCA7Q8IZY2 2146 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 RSPRY1Q96DX4 576 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 ZC3H10Q96K80 434 aaKnown RBP12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 C8orf33Q9H7E9 229 aaPredicted RBP12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 DDX25Q9UHL0 483 aaKnown RBP12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 WDFY3Q8IZQ1 3526 aa12.57□□□□□ -0.4
SUPT16H-202ENST00000552829 IGSF10Q6WRI0 2623 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 MYBPHLA2RUH7 354 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 HEPACAM2A8MVW5 462 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 CHADO15335 359 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 LRG1P02750 347 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 ATF2P15336 505 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 IFNAR1P17181 557 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■■□□□ 12.8
SUPT16H-202ENST00000552829 NLRP5P59047 1200 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 RING1Q06587 406 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 FAM187BQ17R55 369 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 RNF20Q5VTR2 975 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 SYNPOQ8N3V7 929 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 HAS1Q92839 578 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 SMOC1Q9H4F8 434 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 ANO2Q9NQ90 1003 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms