RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 VIL1P09327 827 aaKnown RBP4.94□□□□□ -1.62
USP44-207ENST00000552237 VAV2P52735 878 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 PHC1P78364 1004 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 CYP2A13Q16696 494 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 MTX3Q5HYI7 312 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 LNX2Q8N448 690 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 AFAP1L2Q8N4X5 818 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 SLC5A5Q92911 643 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 NACC2Q96BF6 587 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 USP25Q9UHP3 1055 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 APOBEC2Q9Y235 224 aaKnown RBP4.94□□□□□ -1.62
USP44-207ENST00000552237 ENTPD2Q9Y5L3 495 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 CDY2AQ9Y6F7 541 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 WNT6Q9Y6F9 365 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 RPTORQ8N122 1335 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 CNTNAP2Q9UHC6 1331 aa4.94□□□□□ -1.62
USP44-207ENST00000552237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.93□□□□□ -1.62
USP44-207ENST00000552237 TRIM38O00635 465 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 KDM1AO60341 852 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 ULK1O75385 1050 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 POMCP01189 267 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 RAP2AP10114 183 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 FOLR3P41439 243 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 MANFP55145 182 aaKnown RBP4.93□□□□□ -1.62
USP44-207ENST00000552237 TMPRSS15P98073 1019 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 TRIM25Q14258 630 aaKnown RBP4.93□□□□□ -1.62
USP44-207ENST00000552237 FRMD7Q6ZUT3 714 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 AMIGO2Q86SJ2 522 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 VGLL2Q8N8G2 317 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 ATL2Q8NHH9 583 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 DPF1Q92782 380 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 MRI1Q9BV20 369 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 FAM126AQ9BYI3 521 aaPredicted RBP4.93□□□□□ -1.62
USP44-207ENST00000552237 TMX1Q9H3N1 280 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 ZNF804BA4D1E1 1349 aa4.93□□□□□ -1.62
USP44-207ENST00000552237 BRINP1O60477 761 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 WT1P19544 449 aaPredicted RBP4.92□□□□□ -1.62
USP44-207ENST00000552237 GCSHP23434 173 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 ITPKBP27987 946 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 STAT4Q14765 748 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 KAZNQ674X7 775 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 FCRLBQ6BAA4 426 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 ZNF572Q7Z3I7 529 aaPredicted RBP4.92□□□□□ -1.62
USP44-207ENST00000552237 RASSF3Q86WH2 238 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 TRMT2AQ8IZ69 625 aaKnown RBP4.92□□□□□ -1.62
USP44-207ENST00000552237 FBXO18Q8NFZ0 1043 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 WDR66Q8TBY9 1149 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 UHRF1Q96T88 793 aaPredicted RBP4.92□□□□□ -1.62
USP44-207ENST00000552237 TMPRSS11EQ9UL52 423 aa4.92□□□□□ -1.62
USP44-207ENST00000552237 YY2O15391 372 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 EYA4O95677 639 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 ATP5JP18859 108 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 ADSLP30566 484 aaPredicted RBP4.91□□□□□ -1.62
USP44-207ENST00000552237 CCT4P50991 539 aaKnown RBP4.91□□□□□ -1.62
USP44-207ENST00000552237 LGALS4P56470 323 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 SESN3P58005 492 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 LLGL1Q15334 1064 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 SF3B3Q15393 1217 aaKnown RBP4.91□□□□□ -1.62
USP44-207ENST00000552237 GEN1Q17RS7 908 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 LHFPL2Q6ZUX7 228 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 PEG10Q86TG7 708 aaKnown RBP4.91□□□□□ -1.62
USP44-207ENST00000552237 CLRN3Q8NCR9 226 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 KCTD10Q9H3F6 313 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 MOCS1Q9NZB8 636 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 PNPLA7Q6ZV29 1317 aa4.91□□□□□ -1.62
USP44-207ENST00000552237 AKR1B10O60218 316 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 MAPK10P53779 464 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 SOX10P56693 466 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 TUBA4AP68366 448 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 SLC10A2Q12908 348 aaPredicted RBP4.9□□□□□ -1.63
USP44-207ENST00000552237 EIF2B5Q13144 721 aaKnown RBP4.9□□□□□ -1.63
USP44-207ENST00000552237 GRM1Q13255 1194 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 SP140Q13342 867 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 FHL1Q13642 323 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 MST1LQ2TV78 715 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 KLHL22Q53GT1 634 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 AFMIDQ63HM1 303 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 LYSMD2Q8IV50 215 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 FBXL20Q96IG2 436 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 NRIP3Q9NQ35 241 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 TOPORSQ9NS56 1045 aaPredicted RBP4.9□□□□□ -1.63
USP44-207ENST00000552237 FLRT1Q9NZU1 646 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 ZNF521Q96K83 1311 aa4.9□□□□□ -1.63
USP44-207ENST00000552237 CCDC78A2IDD5 438 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 TP73O15350 636 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 GPR39O43194 453 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 LPLP06858 475 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 PRR35P0CG20 571 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 ALOX15P16050 662 aaPredicted RBP4.89□□□□□ -1.63
USP44-207ENST00000552237 GRIA3P42263 894 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 PER3P56645 1201 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 UBXN2BQ14CS0 331 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 PDCD1Q15116 288 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 FAM153CQ494X1 144 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 CT83Q5H943 113 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 ZNF626Q68DY1 528 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 DDX42Q86XP3 938 aaKnown RBP eCLIP4.89□□□□□ -1.63
USP44-207ENST00000552237 SLC41A1Q8IVJ1 513 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 FAM177A1Q8N128 213 aaPredicted RBP4.89□□□□□ -1.63
USP44-207ENST00000552237 OR7D4Q8NG98 312 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms