RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 TSG101Q99816 390 aa13.09□□□□□ -0.31
RBFOX1-214ENST00000552089 WDR6Q9NNW5 1121 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-214ENST00000552089 RGS18Q9NS28 235 aa13.09□□□□□ -0.31
RBFOX1-214ENST00000552089 RXFP3Q9NSD7 469 aa13.09□□□□□ -0.31
RBFOX1-214ENST00000552089 TMEM161AQ9NX61 479 aa13.09□□□□□ -0.31
RBFOX1-214ENST00000552089 NUMBLQ9Y6R0 609 aa13.09□□□□□ -0.31
RBFOX1-214ENST00000552089 AKR1B15C9JRZ8 316 aaPredicted RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 DYNC1I1O14576 645 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 N4BP3O15049 544 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 TOP3BO95985 862 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 TDGF1P13385 188 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 CD72P21854 359 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 MARK3P27448 753 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 CCT6AP40227 531 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 PBX1P40424 430 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 IGBP1P78318 339 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 GPC5P78333 572 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 EHHADHQ08426 723 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 ITGB3BPQ13352 177 aaPredicted RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 PPP2R5CQ13362 524 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 NEDD9Q14511 834 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 SF3A2Q15428 464 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 FIGNQ5HY92 759 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 C19orf48Q6RUI8 117 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 LSM14BQ9BX40 385 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 BLZF1Q9H2G9 400 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 SAMSN1Q9NSI8 373 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 C2orf16Q68DN1 1984 aa13.08□□□□□ -0.32
RBFOX1-214ENST00000552089 KCNJ18B7U540 433 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 ANHXE9PGG2 379 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 CDC25AP30304 524 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 NOVA1P51513 510 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 TUBB4BP68371 445 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 PPP2R3AQ06190 1150 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 MTAPQ13126 283 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 GIT2Q14161 759 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 KCNJ12Q14500 433 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 PRR16Q569H4 304 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 KLHL10Q6JEL2 608 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 TTI2Q6NXR4 508 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 ARMCX5Q6P1M9 558 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 APTXQ7Z2E3 356 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 TMTC1Q8IUR5 882 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 CSGALNACT2Q8N6G5 542 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 GJA10Q969M2 543 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 CLDN23Q96B33 292 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 TMEM169Q96HH4 297 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 BBC3Q96PG8 261 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 KLHL5Q96PQ7 755 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 MED15Q96RN5 788 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 BAG1Q99933 345 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 SENP7Q9BQF6 1050 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 PYCARDQ9ULZ3 195 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 CTNND2Q9UQB3 1225 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 LAMA5O15230 3695 aa13.07□□□□□ -0.32
RBFOX1-214ENST00000552089 A0A087WWV3 80 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 NT5C1B-RDH14C9J2C7 533 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 HOXA2O43364 376 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 CTSAP10619 480 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 LAMP2P13473 410 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 GAP43P17677 238 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 FECHP22830 423 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 TARSP26639 723 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 RPS9P46781 194 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 TUBB2AQ13885 445 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 ABI1Q8IZP0 508 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 SYT2Q8N9I0 419 aaPredicted RBP13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 CMASQ8NFW8 434 aaPredicted RBP13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 KIF18AQ8NI77 898 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 DDX12PQ92771 950 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 LENG9Q96B70 501 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 CEP63Q96MT8 703 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 PNMA5Q96PV4 448 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 TUBB2BQ9BVA1 445 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 SCNM1Q9BWG6 230 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 RNF19AQ9NV58 838 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 SEL1LQ9UBV2 794 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 TENM4Q6N022 2769 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 FREM2Q5SZK8 3169 aa13.06□□□□□ -0.32
RBFOX1-214ENST00000552089 FRMD3A2A2Y4 597 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 PP2D1A8MPX8 630 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 LGALS16A8MUM7 142 aa13.05□□□□□ -0.32
RBFOX1-214ENST00000552089 GIPC1O14908 333 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms