RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 LRCH1Q9Y2L9 728 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 PLEKHH2Q8IVE3 1493 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 IGSF1Q8N6C5 1336 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 RRBP1Q9P2E9 1410 aaKnown RBP6.43□□□□□ -1.38
CPSF6-206ENST00000550987 XRN1Q8IZH2 1706 aaKnown RBP6.43□□□□□ -1.38
CPSF6-206ENST00000550987 A0A0A6YYK5 440 aaPredicted RBP6.43□□□□□ -1.38
CPSF6-206ENST00000550987 ABHD14A-ACY1A0A1B0GW23 586 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 A0A1W2PPL8 197 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 LRRC14BA6NHZ5 514 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 H0Y858 1186 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 ARIH2O95376 493 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 GLI1P08151 1106 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 LTA4HP09960 611 aaKnown RBP6.43□□□□□ -1.38
CPSF6-206ENST00000550987 MC3RP41968 323 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 PIK3CBP42338 1070 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 RAB1AP62820 205 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 NOGQ13253 232 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 UBE3CQ15386 1083 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 KCNMB1Q16558 191 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 KHDC1Q4VXA5 237 aaKnown RBP6.43□□□□□ -1.38
CPSF6-206ENST00000550987 MPZL3Q6UWV2 235 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 HEATR3Q7Z4Q2 680 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 KRT78Q8N1N4 520 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 DEPTORQ8TB45 409 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 CCHCR1Q8TD31 782 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 PHKBQ93100 1093 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 RAB24Q969Q5 203 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 SLC35A4Q96G79 324 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 RIPOR3Q96MK2 946 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 UIMC1Q96RL1 719 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 SYT3Q9BQG1 590 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 HERPUD2Q9BSE4 406 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 SOX7Q9BT81 388 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 FNIP2Q9P278 1114 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 CPA4Q9UI42 421 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 CORO2BQ9UQ03 480 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 TUBGCP6Q96RT7 1819 aa6.43□□□□□ -1.38
CPSF6-206ENST00000550987 PTPRUQ92729 1446 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 HRKO00198 91 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 BIN1O00499 593 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 KPNA5O15131 536 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 PHGDHO43175 533 aaKnown RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 SGTAO43765 313 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ADAMTS4O75173 837 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 LY86O95711 162 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 MYF5P13349 255 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 HNRNPLP14866 589 aaKnown RBP eCLIP6.42□□□□□ -1.383e-8■■■■■ 29.5
CPSF6-206ENST00000550987 HALP42357 657 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 PRIM2P49643 509 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 HK3P52790 923 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 CDC42EP1Q00587 391 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 SEPT2Q15019 361 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ERAP2Q6P179 960 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ABHD15Q6UXT9 468 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 LDHDQ86WU2 507 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ZNF354CQ86Y25 554 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 SMAP1Q8IYB5 467 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 NSUN6Q8TEA1 469 aaKnown RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 POF1BQ8WVV4 589 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 TMX3Q96JJ7 454 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 FAM167AQ96KS9 214 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 SGCZQ96LD1 299 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 SCLT1Q96NL6 688 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 NT5C1BQ96P26 610 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 VRK1Q99986 396 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ZNF552Q9H707 407 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ZNF287Q9HBT7 754 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 SARS2Q9NP81 518 aaKnown RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 DCP1AQ9NPI6 582 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 KCND1Q9NSA2 647 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 PNPOQ9NVS9 261 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ABCF2Q9UG63 623 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 OGDHLQ9ULD0 1010 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 ATRXP46100 2492 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 WDR33Q9C0J8 1336 aaKnown RBP6.42□□□□□ -1.38
CPSF6-206ENST00000550987 KIF15Q9NS87 1388 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 PLEKHG1Q9ULL1 1385 aa6.42□□□□□ -1.38
CPSF6-206ENST00000550987 COL14A1Q05707 1796 aaKnown RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 CENPFP49454 3210 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 A0A1W2PR48 441 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 RASA4BC9J798 803 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 RASA4O43374 803 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 MAFO75444 373 aaPredicted RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 RPL17P18621 184 aaKnown RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 TM4SF4P48230 202 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 KCNQ1P51787 676 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 ITGA1P56199 1179 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 TRIM14Q14142 442 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 PDCD2Q16342 344 aaPredicted RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 SWSAP1Q6NVH7 229 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 TRMT10BQ6PF06 316 aaKnown RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 APOA5Q6Q788 366 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 PTF1AQ7RTS3 328 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 B3GNT8Q7Z7M8 397 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 RTKN2Q8IZC4 609 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 PQLC1Q8N2U9 271 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 PAF1Q8N7H5 531 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 TTLL6Q8N841 843 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 PLBD2Q8NHP8 589 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms