RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 LAMP2P13473 410 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 NPR3P17342 541 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 AOC1P19801 751 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 OR1D2P34982 312 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 GRM5P41594 1212 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 SOX4Q06945 474 aaPredicted RBP14.66□□□□□ -0.06
NUP188-211ENST00000550219 MAPK7Q13164 816 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 TMEM119Q4V9L6 283 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 RINT1Q6NUQ1 792 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 TAS1R3Q7RTX0 852 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 FSIP1Q8NA03 581 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 ENGASEQ8NFI3 743 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 CDK5RAP3Q96JB5 506 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 UROC1Q96N76 676 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 ACO2Q99798 780 aaKnown RBP14.66□□□□□ -0.06
NUP188-211ENST00000550219 TCHPQ9BT92 498 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 TOPORSQ9NS56 1045 aaPredicted RBP14.66□□□□□ -0.06
NUP188-211ENST00000550219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.66□□□□□ -0.06
NUP188-211ENST00000550219 MTRRQ9UBK8 725 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 CDY1Q9Y6F8 540 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 VWA8A3KMH1 1905 aa14.66□□□□□ -0.06
NUP188-211ENST00000550219 A0A087X0B3 334 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 SMIM28A0A1B0GU29 152 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 A0A1B0GVL5 298 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 KRBA1A5PL33 1030 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 TMEM189-UBE2V1I3L0A0 370 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 XYLBO75191 536 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 HNRNPA1P09651 372 aaKnown RBP eCLIP14.65□□□□□ -0.06
NUP188-211ENST00000550219 SRFP11831 508 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 PFKFB1P16118 471 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 FGFR3P22607 806 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 TXLNAP40222 546 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 NDUFA8P51970 172 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
NUP188-211ENST00000550219 SNW1Q13573 536 aaKnown RBP14.65□□□□□ -0.06
NUP188-211ENST00000550219 HTR4Q13639 388 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 KARSQ15046 597 aaKnown RBP14.65□□□□□ -0.06
NUP188-211ENST00000550219 UPP1Q16831 310 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 DCLRE1AQ6PJP8 1040 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 SLC44A3Q8N4M1 653 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 GPR152Q8TDT2 470 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 DDX27Q96GQ7 796 aaKnown RBP14.65□□□□□ -0.06
NUP188-211ENST00000550219 SNX27Q96L92 541 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 TMEM134Q9H6X4 195 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 HCFC1R1Q9NWW0 138 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 ARHGAP28Q9P2N2 729 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 KCNH3Q9ULD8 1083 aa14.65□□□□□ -0.06
NUP188-211ENST00000550219 MTCL1Q9Y4B5 1905 aaKnown RBP14.64□□□□□ -0.07
NUP188-211ENST00000550219 PODXLO00592 558 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 TRAPPC3O43617 180 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 PAPLNO95428 1278 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 MCF2P10911 925 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 MATR3P43243 847 aaKnown RBP eCLIP14.64□□□□□ -0.07
NUP188-211ENST00000550219 ARPP19P56211 112 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 STRN3Q13033 797 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 RAB33AQ14088 237 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 E2F4Q16254 413 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 SEZ6Q53EL9 994 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 MPZL3Q6UWV2 235 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 RSPO2Q6UXX9 243 aaPredicted RBP14.64□□□□□ -0.07
NUP188-211ENST00000550219 C1orf186Q6ZWK4 172 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 CCDC105Q8IYK2 499 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 FMR1NBQ8N0W7 255 aaPredicted RBP14.64□□□□□ -0.07
NUP188-211ENST00000550219 LRRC15Q8TF66 581 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 ING5Q8WYH8 240 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 NXPE3Q969Y0 559 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 ACAP3Q96P50 834 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 RTP3Q9BQQ7 232 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 PYM1Q9BRP8 204 aaKnown RBP14.64□□□□□ -0.07
NUP188-211ENST00000550219 TBC1D17Q9HA65 648 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 ARHGEF3Q9NR81 526 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 SLC38A7Q9NVC3 462 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 CCDC39Q9UFE4 941 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 CDH7Q9ULB5 785 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 NUB1Q9Y5A7 615 aa14.64□□□□□ -0.07
NUP188-211ENST00000550219 PIEZO1Q92508 2521 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 PLCG1P19174 1290 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 PTMSP20962 102 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 HOXA9P31269 272 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 SYKP43405 635 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 FAM160A1Q05DH4 1040 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 NOLC1Q14978 699 aaKnown RBP eCLIP14.63□□□□□ -0.07
NUP188-211ENST00000550219 RRAGBQ5VZM2 374 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 PARM1Q6UWI2 310 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 CD300LGQ6UXG3 332 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 CCDC73Q6ZRK6 1079 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 ANKS3Q6ZW76 656 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 ASCL5Q7RTU5 278 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 FRMD5Q7Z6J6 570 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 DTWD2Q8NBA8 298 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 ITFG1Q8TB96 612 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 FGF14Q92915 247 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 C18orf25Q96B23 403 aaPredicted RBP14.63□□□□□ -0.07
NUP188-211ENST00000550219 BICD1Q96G01 975 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 ZBTB45Q96K62 511 aaPredicted RBP14.63□□□□□ -0.07
NUP188-211ENST00000550219 ZMAT2Q96NC0 199 aaKnown RBP14.63□□□□□ -0.07
NUP188-211ENST00000550219 PTPRHQ9HD43 1115 aa14.63□□□□□ -0.07
NUP188-211ENST00000550219 BLOC1S4Q9NUP1 217 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms