RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TRPV5Q9NQA5 729 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 AVENQ9NQS1 362 aaPredicted RBP13.48□□□□□ -0.25
DDX54-206ENST00000549271 WASF3Q9UPY6 502 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 GIT1Q9Y2X7 761 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 MRPS23Q9Y3D9 190 aaKnown RBP13.48□□□□□ -0.25
DDX54-206ENST00000549271 SF3B1O75533 1304 aaKnown RBP eCLIP13.47□□□□□ -0.259e-6■■■■■ 68.9
DDX54-206ENST00000549271 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 ADAM12O43184 909 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX54-206ENST00000549271 ARL2P36404 184 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 CYP4A11Q02928 519 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 MBTD1Q05BQ5 628 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 PSMD5Q16401 504 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 RTL10Q7L3V2 364 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 MAP4K3Q8IVH8 894 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 C12orf50Q8NA57 414 aaPredicted RBP13.47□□□□□ -0.25
DDX54-206ENST00000549271 TTPALQ9BTX7 342 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
DDX54-206ENST00000549271 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
DDX54-206ENST00000549271 LOC400499M0QZD8 3231 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 SRRM3A6NNA2 597 aaPredicted RBP13.46□□□□□ -0.25
DDX54-206ENST00000549271 TADA2AO75478 443 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.25
DDX54-206ENST00000549271 RHOP08100 348 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 GRIK3Q13003 919 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 PTGDRQ13258 359 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 CAPSQ13938 189 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 RAB33AQ14088 237 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 TRIM29Q14134 588 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 GRM2Q14416 872 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
DDX54-206ENST00000549271 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 IRF7Q92985 503 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 LOXL4Q96JB6 756 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 MTMR9Q96QG7 549 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 PAAF1Q9BRP4 392 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 ARRDC1-AS1Q9H2J1 176 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
DDX54-206ENST00000549271 CACNG4Q9UBN1 327 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 PIAS3Q9Y6X2 628 aa13.46□□□□□ -0.25
DDX54-206ENST00000549271 INO80B-WBP1J3KQ70 363 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 NRG2O14511 850 aaPredicted RBP13.45□□□□□ -0.26
DDX54-206ENST00000549271 AXIN1O15169 862 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 CEBPBP17676 345 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 ARF4P18085 180 aaPredicted RBP13.45□□□□□ -0.26
DDX54-206ENST00000549271 HOXA6P31267 233 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 RARRES1P49788 294 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
DDX54-206ENST00000549271 CCDC6Q16204 474 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 CALCRLQ16602 461 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 PLA2G2CQ5R387 149 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 FAM171A1Q5VUB5 890 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 PSAPL1Q6NUJ1 521 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 CEP68Q76N32 757 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 HACE1Q8IYU2 909 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 ASAP3Q8TDY4 903 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 TBC1D32Q96NH3 1257 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 TRMT61BQ9BVS5 477 aaKnown RBP13.45□□□□□ -0.26
DDX54-206ENST00000549271 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 NXF3Q9H4D5 531 aaKnown RBP13.45□□□□□ -0.26
DDX54-206ENST00000549271 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
DDX54-206ENST00000549271 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
DDX54-206ENST00000549271 EML5Q05BV3 1969 aa13.45□□□□□ -0.26
DDX54-206ENST00000549271 A0A1B0GUA9 196 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 EPN2O95208 641 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 GLRA2P23416 452 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 AKAP5P24588 427 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 RAP1GAPP47736 663 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 MLLT6P55198 1093 aaPredicted RBP13.44□□□□□ -0.26
DDX54-206ENST00000549271 RING1Q06587 406 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 SAFBQ15424 915 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDX54-206ENST00000549271 WDR44Q5JSH3 913 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 FAM78AQ5JUQ0 283 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 PRSS36Q5K4E3 855 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 HEATR6Q6AI08 1181 aaKnown RBP13.44□□□□□ -0.26
DDX54-206ENST00000549271 PDXDC1Q6P996 788 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 SLC27A1Q6PCB7 646 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 PPP4R3CPQ6ZMV5 832 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 WDR5BQ86VZ2 330 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 CEP57Q86XR8 500 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 HASPINQ8TF76 798 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 GATA6Q92908 595 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 CPB2Q96IY4 423 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 PRIMPOLQ96LW4 560 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 TMEM60Q9H2L4 133 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 FOXP1Q9H334 677 aaPredicted RBP13.44□□□□□ -0.26
DDX54-206ENST00000549271 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 C2orf42Q9NWW7 574 aa13.44□□□□□ -0.26
DDX54-206ENST00000549271 ASH1LQ9NR48 2969 aaKnown RBP13.43□□□□□ -0.26
DDX54-206ENST00000549271 ARNTLO00327 626 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 NEMFO60524 1076 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 KIF4AO95239 1232 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 PSMC3P17980 439 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 CCNE1P24864 410 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 HOXC13P31276 330 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 OR1D2P34982 312 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 TUSC3Q13454 348 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms