RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 FSCN1Q16658 493 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 ME3Q16798 604 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 VWA3BQ502W6 1294 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 LRRC24Q50LG9 513 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 PITRM1Q5JRX3 1037 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TOR2AQ5JU69 321 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TTC38Q5R3I4 469 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 PHF19Q5T6S3 580 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 VPS53Q5VIR6 699 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 PRAMEF9Q5VWM5 478 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CAVIN1Q6NZI2 390 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CCDC62Q6P9F0 684 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CWC27Q6UX04 472 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TMC5Q6UXY8 1006 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CD300LDQ6UXZ3 194 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 KSR2Q6VAB6 950 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 ESPNLQ6ZVH7 1005 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 COPS6Q7L5N1 327 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 C14orf80Q86SX3 495 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 PNMA8AQ86V59 439 aaPredicted RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 LDHDQ86WU2 507 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 PHYKPLQ8IUZ5 450 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 LYSMD2Q8IV50 215 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CCDC83Q8IWF9 413 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TPH2Q8IWU9 490 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CMTR2Q8IYT2 770 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CHPFQ8IZ52 775 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CPA6Q8N4T0 437 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 C7orf31Q8N865 590 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 JPH3Q8WXH2 748 aaPredicted RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 CHFRQ96EP1 664 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 MAML3Q96JK9 1138 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TEKT5Q96M29 485 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 ACAP3Q96P50 834 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 SLC2A13Q96QE2 648 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TUBGCP5Q96RT8 1024 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 MYD88Q99836 296 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 FOXB1Q99853 325 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 FUCA2Q9BTY2 467 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 QRSL1Q9H0R6 528 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 SIL1Q9H173 461 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 BOLA2Q9H3K6 86 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 BICC1Q9H694 974 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TCF7L1Q9HCS4 588 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 INCENPQ9NQS7 918 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 HYPKQ9NX55 129 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 ARHGAP28Q9P2N2 729 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 TMPRSS11EQ9UL52 423 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 PCDHA5Q9Y5H7 936 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 UTYO14607 1347 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 USP42Q9H9J4 1324 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 MST1RQ04912 1400 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 ADGRL3Q9HAR2 1447 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 ZNF142P52746 1687 aaPredicted RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 ARFGEF2Q9Y6D5 1785 aa2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 AFDNP55196 1824 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-206ENST00000549100 NUP188Q5SRE5 1749 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 PXDNLA1KZ92 1463 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 ZNF609O15014 1411 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 IRS2Q9Y4H2 1338 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 SYCE3A1L190 88 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 UBE2Q2LH0YL09 131 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 SNAP23O00161 211 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 HRKO00198 91 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 ABLIM1O14639 778 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 NOBOXO60393 691 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 JAK2O60674 1132 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 RFPL1O75677 317 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 SNUPNO95149 360 aaKnown RBP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 APOL3O95236 402 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 IL18BPO95998 194 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 PFKMP08237 780 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 GNAI3P08754 354 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 UBTFL1P0CB47 393 aaPredicted RBP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 PF4V1P10720 104 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 AGXTP21549 392 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 CCND1P24385 295 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 ADORA1P30542 326 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 RECQLP46063 649 aaPredicted RBP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 MTNR1BP49286 362 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 MRE11P49959 708 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 TBX4P57082 545 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 TIMM10P62072 90 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 NKX3-2P78367 333 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 KRT85P78386 507 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 CACNB2Q08289 660 aaPredicted RBP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 TFCP2Q12800 502 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 TCIRG1Q13488 830 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 MTX1Q13505 466 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 TRIM25Q14258 630 aaKnown RBP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 GCKRQ14397 625 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 NOLC1Q14978 699 aaKnown RBP eCLIP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 CLUL1Q15846 466 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 SKIDA1Q1XH10 827 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 KLHL40Q2TBA0 621 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 PLEKHO1Q53GL0 409 aaPredicted RBP2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 TMEM240Q5SV17 173 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 FAM102BQ5T8I3 360 aa2.8□□□□□ -1.96
DEPDC4-206ENST00000549100 CCDC181Q5TID7 509 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms