RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 POLGP54098 1239 aaPredicted RBP21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 BCAR1P56945 870 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 FKBP3Q00688 224 aaKnown RBP21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 EDRF1Q3B7T1 1238 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 CLLU1OSQ5K130 101 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 KIAA0319Q5VV43 1072 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 ZNF746Q6NUN9 644 aaPredicted RBP21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 TMEM139Q8IV31 216 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 CNGA4Q8IV77 575 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 SCFD1Q8WVM8 642 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 AUTS2Q8WXX7 1259 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 IQCDQ96DY2 449 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 RUSC1Q9BVN2 902 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 NAA15Q9BXJ9 866 aaKnown RBP21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 KCTD10Q9H3F6 313 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 DLGAP2Q9P1A6 1054 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 TCEAL9Q9UHQ7 104 aa21.73■■□□□ 1.07
CTDSP2-204ENST00000548823 C2orf16Q68DN1 1984 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 ARHGAP6O43182 974 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 GPR32O75388 356 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 GNA14O95837 355 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 FECHP22830 423 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 QARSP47897 775 aaKnown RBP21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 ATXN1P54253 815 aaKnown RBP21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 TERF1P54274 439 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 MARSP56192 900 aaKnown RBP21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 UBXN1Q04323 297 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 PHLDB3Q6NSJ2 640 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 C4orf19Q8IY42 314 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 C17orf53Q8N3J3 647 aaPredicted RBP21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 GPR161Q8N6U8 529 aaKnown RBP21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 PIGOQ8TEQ8 1089 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 BORCS6Q96GS4 357 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 PPP1R16BQ96T49 567 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 MRPL9Q9BYD2 267 aaKnown RBP21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 CA14Q9ULX7 337 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 SIT1Q9Y3P8 196 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 CACNA1IQ9P0X4 2223 aa21.72■■□□□ 1.07
CTDSP2-204ENST00000548823 UBE4BO95155 1302 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 IGKV6D-21A0A0A0MT36 114 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 SPDYE4A6NLX3 237 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 WDR64B1ANS9 1081 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 EIF3DO15371 548 aaKnown RBP eCLIP21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 DCNP07585 359 aaKnown RBP21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 MTIF2P46199 727 aaKnown RBP21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 ZNF484Q5JVG2 852 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 C15orf39Q6ZRI6 1047 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 DDX53Q86TM3 631 aaKnown RBP21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 SFR1Q86XK3 245 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 CCAR2Q8N163 923 aaKnown RBP21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 ERGIC2Q96RQ1 377 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 TIPINQ9BVW5 301 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 WRAP73Q9P2S5 460 aaPredicted RBP21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 TRAF3IP3Q9Y228 551 aa21.71■■□□□ 1.07
CTDSP2-204ENST00000548823 MAP1BP46821 2468 aaKnown RBP21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 CFAP47Q6ZTR5 3102 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 CARNS1A5YM72 827 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 DKC1O60832 514 aaKnown RBP eCLIP21.7■■□□□ 1.067e-21■■■■■ 49.4
CTDSP2-204ENST00000548823 MFAP3LO75121 409 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 FAM13AO94988 1023 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 MAN2A1Q16706 1144 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 SMAP1Q8IYB5 467 aaPredicted RBP21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 RNF169Q8NCN4 708 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 GLIS3Q8NEA6 775 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 HELQQ8TDG4 1101 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 BAG1Q99933 345 aaPredicted RBP21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 NUP58Q9BVL2 599 aa21.7■■□□□ 1.06
CTDSP2-204ENST00000548823 GPR179Q6PRD1 2367 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 MYH9P35579 1960 aaKnown RBP21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 ARID2Q68CP9 1835 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 ARHGEF35A5YM69 484 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 DDX39AO00148 427 aaKnown RBP21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 PDXKO00764 312 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 TUBB4AP04350 444 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 SRFP11831 508 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 PSMC5P62195 406 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 CACNB1Q02641 598 aaPredicted RBP21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 NFIL3Q16649 462 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 FIGNQ5HY92 759 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 MIIPQ5JXC2 388 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 VARS2Q5ST30 1063 aaKnown RBP21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 SLC44A3Q8N4M1 653 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 RSAD2Q8WXG1 361 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 NXPE3Q969Y0 559 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 PARVGQ9HBI0 331 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 ANKEF1Q9NU02 776 aa21.69■■□□□ 1.06
CTDSP2-204ENST00000548823 ZBTB42B2RXF5 422 aa21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 N4BP1O75113 896 aaKnown RBP21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 VTNP04004 478 aa21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 GYPCP04921 128 aa21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 MAPTP10636 758 aaKnown RBP21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 PRKCSHP14314 528 aaPredicted RBP21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 KNOP1Q1ED39 458 aaKnown RBP21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 FAM160B1Q5W0V3 765 aa21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 E4F1Q66K89 784 aaPredicted RBP21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 STXBP4Q6ZWJ1 553 aa21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 ZNF598Q86UK7 904 aaKnown RBP21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 TMEM173Q86WV6 379 aaPredicted RBP21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 FGFBP2Q9BYJ0 223 aa21.68■■□□□ 1.06
CTDSP2-204ENST00000548823 ZHX3Q9H4I2 956 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms