RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SLC27A1Q6PCB7 646 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 PROSER1Q86XN7 944 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 GLYCTKQ8IVS8 523 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 ZBTB8OSQ8IWT0 167 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 GLIS3Q8NEA6 775 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 HAS1Q92839 578 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 EIF2AK1Q9BQI3 630 aaKnown RBP9.37□□□□□ -0.91
TROAP-208ENST00000548817 EDEM2Q9BV94 578 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 TRMT61BQ9BVS5 477 aaKnown RBP9.37□□□□□ -0.91
TROAP-208ENST00000548817 RNF39Q9H2S5 420 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 WRAP73Q9P2S5 460 aaPredicted RBP9.37□□□□□ -0.91
TROAP-208ENST00000548817 ADAM28Q9UKQ2 775 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 MRPS23Q9Y3D9 190 aaKnown RBP9.37□□□□□ -0.91
TROAP-208ENST00000548817 GPSM3Q9Y4H4 160 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 HES2Q9Y543 173 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 PIAS3Q9Y6X2 628 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 LAMA5O15230 3695 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 NOTCH4Q99466 2003 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 LRRIQ4A6NIV6 560 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 EIF4E1BA6NMX2 242 aaKnown RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 GIPC1O14908 333 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 RPP40O75818 363 aaKnown RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 LYPLA2O95372 231 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 NPTXRO95502 500 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 XRCC6P12956 609 aaKnown RBP eCLIP9.36□□□□□ -0.91
TROAP-208ENST00000548817 ARF4P18085 180 aaPredicted RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 AKAP5P24588 427 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 TXKP42681 527 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 MBTD1Q05BQ5 628 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 SCRN1Q12765 414 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 GRIK3Q13003 919 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 DGKKQ5KSL6 1271 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 SH3PXD2AQ5TCZ1 1133 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 HEATR6Q6AI08 1181 aaKnown RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 SYNPOQ8N3V7 929 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 OXER1Q8TDS5 423 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 DEPDC1BQ8WUY9 529 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 ZC3H10Q96K80 434 aaKnown RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 ZFP42Q96MM3 310 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 PLA2G2FQ9BZM2 168 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 POLR3FQ9H1D9 316 aaPredicted RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 TTC12Q9H892 705 aaPredicted RBP9.36□□□□□ -0.91
TROAP-208ENST00000548817 MIOSQ9NXC5 875 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 CACNA2D2Q9NY47 1150 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 POLIQ9UNA4 740 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 ZMYM2Q9UBW7 1377 aa9.36□□□□□ -0.91
TROAP-208ENST00000548817 ARID2Q68CP9 1835 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 SF3B1O75533 1304 aaKnown RBP eCLIP9.35□□□□□ -0.91
TROAP-208ENST00000548817 TICRRQ7Z2Z1 1910 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 KALRNO60229 2985 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 C4orf47A7E2U8 309 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 CCL16O15467 120 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 NEMFO60524 1076 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 USO1O60763 962 aaKnown RBP9.35□□□□□ -0.91
TROAP-208ENST00000548817 MICAL2O94851 1124 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 ATP2B1P20020 1258 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 ARL2P36404 184 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 ELAVL2Q12926 359 aaKnown RBP9.35□□□□□ -0.91
TROAP-208ENST00000548817 CAPSQ13938 189 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 HSP90AA2PQ14568 343 aaPredicted RBP9.35□□□□□ -0.91
TROAP-208ENST00000548817 CCDC6Q16204 474 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 TANGO2Q6ICL3 276 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 MAEAQ7L5Y9 396 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 APBB1IPQ7Z5R6 666 aaPredicted RBP9.35□□□□□ -0.91
TROAP-208ENST00000548817 CEP57Q86XR8 500 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 MCPH1Q8NEM0 835 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 ERMNQ8TAM6 284 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 ASAP3Q8TDY4 903 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 PIK3R5Q8WYR1 880 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 PRIMPOLQ96LW4 560 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 HSD17B14Q9BPX1 270 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 ADPGKQ9BRR6 497 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 NFKBIZQ9BYH8 718 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 GPR62Q9BZJ7 368 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 C2orf40Q9H1Z8 148 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 NXF3Q9H4D5 531 aaKnown RBP9.35□□□□□ -0.91
TROAP-208ENST00000548817 ZFP14Q9HCL3 533 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
TROAP-208ENST00000548817 XPNPEP1Q9NQW7 623 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 IGSF5Q9NSI5 407 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 PRMT7Q9NVM4 692 aaPredicted RBP9.35□□□□□ -0.91
TROAP-208ENST00000548817 TENM4Q6N022 2769 aa9.35□□□□□ -0.91
TROAP-208ENST00000548817 A0A1B0GUA9 196 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 FAM221BA6H8Z2 402 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 H0Y626 953 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 N4BP3O15049 544 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 TRIM16O95361 564 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 TOP3BO95985 862 aaKnown RBP9.34□□□□□ -0.91
TROAP-208ENST00000548817 THP07101 528 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 PSMC3P17980 439 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 RPL17P18621 184 aaKnown RBP9.34□□□□□ -0.91
TROAP-208ENST00000548817 LIG1P18858 919 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 GLRA2P23416 452 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 FCARP24071 287 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 RARRES1P49788 294 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms