RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ABHD14A-ACY1A0A1B0GW23 586 aa31.02■■■□□ 2.56
BRF1-213ENST00000548421 ACTN1P12814 892 aa31.02■■■□□ 2.56
BRF1-213ENST00000548421 DPY19L2P1Q6NXN4 242 aa31.02■■■□□ 2.56
BRF1-213ENST00000548421 PPFIBP1Q86W92 1011 aa31.02■■■□□ 2.56
BRF1-213ENST00000548421 BADQ92934 168 aa31.02■■■□□ 2.56
BRF1-213ENST00000548421 PPP1R10Q96QC0 940 aaKnown RBP31.02■■■□□ 2.56
BRF1-213ENST00000548421 RNF19AQ9NV58 838 aa31.02■■■□□ 2.56
BRF1-213ENST00000548421 SLC38A7Q9NVC3 462 aa31.02■■■□□ 2.56
BRF1-213ENST00000548421 INPPL1O15357 1258 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 EFCAB14O75071 495 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 CYP3A5P20815 502 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 FPGSQ05932 587 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 TRPC3Q13507 836 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 GLB1LQ6UWU2 654 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 C18orf25Q96B23 403 aaPredicted RBP31.01■■■□□ 2.56
BRF1-213ENST00000548421 TTYH3Q9C0H2 523 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 SIX2Q9NPC8 291 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 TUBGCP4Q9UGJ1 667 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 LRFN2Q9ULH4 789 aa31.01■■■□□ 2.56
BRF1-213ENST00000548421 GTF3C5Q9Y5Q8 519 aaPredicted RBP31.01■■■□□ 2.56
BRF1-213ENST00000548421 ZC3H11AO75152 810 aaKnown RBP eCLIP31.01■■■□□ 2.55
BRF1-213ENST00000548421 OFD1O75665 1012 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 NOL4O94818 638 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 GYPCP04921 128 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 ITGB3P05106 788 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 THP07101 528 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 TPM1P09493 284 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 SCNN1GP51170 649 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 KLHDC7AQ5VTJ3 777 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 GANQ9H2C0 597 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 APEX2Q9UBZ4 518 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 SIX4Q9UIU6 781 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 PLAGL2Q9UPG8 496 aa31.01■■■□□ 2.55
BRF1-213ENST00000548421 EPHB6O15197 1021 aa31■■■□□ 2.55
BRF1-213ENST00000548421 LRRN2O75325 713 aa31■■■□□ 2.55
BRF1-213ENST00000548421 CST3P01034 146 aaPredicted RBP31■■■□□ 2.55
BRF1-213ENST00000548421 KRT19P08727 400 aa31■■■□□ 2.55
BRF1-213ENST00000548421 ACRP10323 421 aa31■■■□□ 2.55
BRF1-213ENST00000548421 AFF1P51825 1210 aaKnown RBP31■■■□□ 2.55
BRF1-213ENST00000548421 GUCY2FP51841 1108 aa31■■■□□ 2.55
BRF1-213ENST00000548421 APBA1Q02410 837 aa31■■■□□ 2.55
BRF1-213ENST00000548421 WDR44Q5JSH3 913 aa31■■■□□ 2.55
BRF1-213ENST00000548421 NPAS4Q8IUM7 802 aa31■■■□□ 2.55
BRF1-213ENST00000548421 CCDC150Q8NCX0 1101 aa31■■■□□ 2.55
BRF1-213ENST00000548421 CXorf38Q8TB03 319 aa31■■■□□ 2.55
BRF1-213ENST00000548421 IMPG2Q9BZV3 1241 aa31■■■□□ 2.55
BRF1-213ENST00000548421 PCDH10Q9P2E7 1040 aa31■■■□□ 2.55
BRF1-213ENST00000548421 INPP5FQ9Y2H2 1132 aa31■■■□□ 2.55
BRF1-213ENST00000548421 R3HCC1Q9Y3T6 440 aaKnown RBP31■■■□□ 2.55
BRF1-213ENST00000548421 BAIAP3O94812 1187 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 GRIK3Q13003 919 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 CLLU1OSQ5K130 101 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 CRIPAKQ8N1N5 446 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 HELQQ8TDG4 1101 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 DPF3Q92784 378 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 NT5C1BQ96P26 610 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 MIOSQ9NXC5 875 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 CEP72Q9P209 647 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 FBXL5Q9UKA1 691 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 DAAM1Q9Y4D1 1078 aa30.99■■■□□ 2.55
BRF1-213ENST00000548421 A0A1W2PQJ5 194 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 HOXA2O43364 376 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 FGFR1P11362 822 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 UCHL3P15374 230 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 POLR2BP30876 1174 aaKnown RBP30.98■■■□□ 2.55
BRF1-213ENST00000548421 RBP5P82980 135 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.98■■■□□ 2.55
BRF1-213ENST00000548421 CPLX3Q8WVH0 158 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 PI4K2AQ9BTU6 479 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 EDEM3Q9BZQ6 932 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 CAPN11Q9UMQ6 739 aa30.98■■■□□ 2.55
BRF1-213ENST00000548421 ASS1P00966 412 aaKnown RBP30.97■■■□□ 2.55
BRF1-213ENST00000548421 SYN1P17600 705 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 RFX1P22670 979 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 CASP14P31944 242 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 MYL6P60660 151 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 SOX4Q06945 474 aaPredicted RBP30.97■■■□□ 2.55
BRF1-213ENST00000548421 LRMPQ12912 555 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 NAB2Q15742 525 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 SGSM1Q2NKQ1 1148 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 SCARA3Q6AZY7 606 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 PHLDB3Q6NSJ2 640 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 TMEM130Q8N3G9 435 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 URGCPQ8TCY9 931 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 TAF4BQ92750 862 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.97■■■□□ 2.552e-9■■■■■ 192.5
BRF1-213ENST00000548421 AGAP1Q9UPQ3 857 aa30.97■■■□□ 2.55
BRF1-213ENST00000548421 POMCP01189 267 aa30.96■■■□□ 2.55
BRF1-213ENST00000548421 FXR1P51114 621 aaKnown RBP eCLIP30.96■■■□□ 2.55
BRF1-213ENST00000548421 POLR2FP61218 127 aaKnown RBP30.96■■■□□ 2.55
BRF1-213ENST00000548421 NOP14P78316 857 aaKnown RBP30.96■■■□□ 2.55
BRF1-213ENST00000548421 NOMO2Q5JPE7 1267 aa30.96■■■□□ 2.55
BRF1-213ENST00000548421 CACNA2D4Q7Z3S7 1137 aa30.96■■■□□ 2.55
BRF1-213ENST00000548421 ABI1Q8IZP0 508 aa30.96■■■□□ 2.55
BRF1-213ENST00000548421 RSPH1Q8WYR4 309 aa30.96■■■□□ 2.55
BRF1-213ENST00000548421 ZMYND8Q9ULU4 1186 aaPredicted RBP30.96■■■□□ 2.55
BRF1-213ENST00000548421 FHOD1Q9Y613 1164 aa30.96■■■□□ 2.55
BRF1-213ENST00000548421 FNDC1Q4ZHG4 1894 aaPredicted RBP30.96■■■□□ 2.55
BRF1-213ENST00000548421 CLSTN1O94985 981 aa30.95■■■□□ 2.55
BRF1-213ENST00000548421 AMHP03971 560 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms