RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 FRMD4BQ9Y2L6 1034 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 MYO7AQ13402 2215 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 PRRC2BQ5JSZ5 2229 aaKnown RBP18.85■□□□□ 0.61
HDAC7-227ENST00000548080 PTGESO14684 152 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 GRM6O15303 877 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 ITGB1P05556 798 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 LAG3P18627 525 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 CASP4P49662 377 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 BCAR1P56945 870 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 SPECC1LQ69YQ0 1117 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 KCNT2Q6UVM3 1135 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 CCDC186Q7Z3E2 898 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 APBB1IPQ7Z5R6 666 aaPredicted RBP18.84■□□□□ 0.61
HDAC7-227ENST00000548080 TMEM130Q8N3G9 435 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 ZNF558Q96NG5 402 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 SAMD11Q96NU1 681 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 MSTO1Q9BUK6 570 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 CCDC94Q9BW85 323 aaPredicted RBP18.84■□□□□ 0.61
HDAC7-227ENST00000548080 NDST4Q9H3R1 872 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 F8W810 466 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 H3BNC9 293 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 EXOC3O60645 756 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 DNAJB1P25685 340 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 SLC11A1P49279 550 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 PPP2R3AQ06190 1150 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 PTPN21Q16825 1174 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 FKBP15Q5T1M5 1219 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 ARMCX5Q6P1M9 558 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 TMEM173Q86WV6 379 aaPredicted RBP18.84■□□□□ 0.61
HDAC7-227ENST00000548080 FAM186BQ8IYM0 893 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 BCL7CQ8WUZ0 217 aaPredicted RBP18.84■□□□□ 0.61
HDAC7-227ENST00000548080 FAM193BQ96PV7 902 aaPredicted RBP18.84■□□□□ 0.61
HDAC7-227ENST00000548080 CBWD1Q9BRT8 395 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 RWDD3Q9Y3V2 267 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 PCDHB12Q9Y5F1 795 aa18.84■□□□□ 0.61
HDAC7-227ENST00000548080 A0A0B4J269 797 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 A0A1W2PQC6 194 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 C5orf67F2Z3F1 127 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 TULP1O00294 542 aaPredicted RBP18.83■□□□□ 0.6
HDAC7-227ENST00000548080 CXCL8P10145 99 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 ADSSP30520 456 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 GSDMDP57764 484 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 CCDC85BQ15834 202 aaPredicted RBP18.83■□□□□ 0.6
HDAC7-227ENST00000548080 XXYLT1Q8NBI6 393 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 PPM1EQ8WY54 764 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 POMGNT1Q8WZA1 660 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 SAAL1Q96ER3 474 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 BORCS6Q96GS4 357 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 ACAP3Q96P50 834 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 C11orf84Q9BUA3 381 aaPredicted RBP18.83■□□□□ 0.6
HDAC7-227ENST00000548080 PCIF1Q9H4Z3 704 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 AAASQ9NRG9 546 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 HSPBP1Q9NZL4 362 aa18.83■□□□□ 0.6
HDAC7-227ENST00000548080 PRG3Q9Y2Y8 225 aaPredicted RBP18.83■□□□□ 0.6
HDAC7-227ENST00000548080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDAC7-227ENST00000548080 ITIH6Q6UXX5 1313 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 OGTO15294 1046 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 INPPL1O15357 1258 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 FAM189A1O60320 539 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 FGF18O76093 207 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 GARTP22102 1010 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 OR1G1P47890 313 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 ACOT2P49753 483 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 YARSP54577 528 aaKnown RBP18.82■□□□□ 0.6
HDAC7-227ENST00000548080 TBX2Q13207 712 aaPredicted RBP18.82■□□□□ 0.6
HDAC7-227ENST00000548080 SNX27Q96L92 541 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 GOLGA2P5Q9HBQ8 144 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 PCDHGC5Q9Y5F6 944 aa18.82■□□□□ 0.6
HDAC7-227ENST00000548080 GOLGA8IPA6NC78 632 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 CASTOR2A6NHX0 329 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 GOLGA8JA6NMD2 632 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 MAPK13O15264 365 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 RB1P06400 928 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 GALTP07902 379 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 GRIK3Q13003 919 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 PDCD11Q14690 1871 aaKnown RBP18.81■□□□□ 0.6
HDAC7-227ENST00000548080 SLC10A6Q3KNW5 377 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 COLGALT2Q8IYK4 626 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 SLC39A11Q8N1S5 342 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 SPPL3Q8TCT6 385 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 FAM212AQ96EL1 285 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 ZMAT2Q96NC0 199 aaKnown RBP18.81■□□□□ 0.6
HDAC7-227ENST00000548080 PAAF1Q9BRP4 392 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 PLVAPQ9BX97 442 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 KANSL3Q9P2N6 904 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 AGO2Q9UKV8 859 aaKnown RBP18.81■□□□□ 0.6
HDAC7-227ENST00000548080 MTCH2Q9Y6C9 303 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 STYXL1Q9Y6J8 313 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 EYSQ5T1H1 3165 aa18.81■□□□□ 0.6
HDAC7-227ENST00000548080 REV3LO60673 3130 aa18.8■□□□□ 0.6
HDAC7-227ENST00000548080 NRP1O14786 923 aa18.8■□□□□ 0.6
HDAC7-227ENST00000548080 ALDH7A1P49419 539 aaKnown RBP18.8■□□□□ 0.6
HDAC7-227ENST00000548080 DSC1Q08554 894 aa18.8■□□□□ 0.6
HDAC7-227ENST00000548080 ENOX2Q16206 610 aaKnown RBP18.8■□□□□ 0.6
HDAC7-227ENST00000548080 SLFN12LQ6IEE8 588 aa18.8■□□□□ 0.6
HDAC7-227ENST00000548080 POF1BQ8WVV4 589 aa18.8■□□□□ 0.6
HDAC7-227ENST00000548080 ERGIC2Q96RQ1 377 aa18.8■□□□□ 0.6
HDAC7-227ENST00000548080 SPG21Q9NZD8 308 aa18.8■□□□□ 0.6
HDAC7-227ENST00000548080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.8■□□□□ 0.65e-7■■□□□ 14.2
HDAC7-227ENST00000548080 ANK1P16157 1881 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms