RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 PHLDB3Q6NSJ2 640 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 FMNL3Q8IVF7 1028 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 POMGNT1Q8WZA1 660 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 WNT8BQ93098 351 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 SAAL1Q96ER3 474 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 FAM161BQ96MY7 647 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 SUCLA2Q9P2R7 463 aaPredicted RBP17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 GTF2IRD1Q9UHL9 959 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 A0A0C4DFX4 3053 aa17.83■□□□□ 0.44
CHMP1A-204ENST00000547687 DDX3XO00571 662 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 ERLIN1O75477 346 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 CCDC172P0C7W6 258 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 C1orf220Q5T0J3 134 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 OTOP2Q7RTS6 562 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 RHPN2Q8IUC4 686 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 RNF149Q8NC42 400 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 DHX38Q92620 1227 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 VWCEQ96DN2 955 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 KATNAL1Q9BW62 490 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 GPR88Q9GZN0 384 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 NENFQ9UMX5 172 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 EDN1P05305 212 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 SCP2P22307 547 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 RFX1P22670 979 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 GCLMP48507 274 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 LIG4P49917 911 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 LONRF2Q1L5Z9 754 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 CBWD2Q8IUF1 395 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 PLEKHO2Q8TD55 490 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 TMEM134Q9H6X4 195 aa17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 CXXC1Q9P0U4 656 aaPredicted RBP17.82■□□□□ 0.44
CHMP1A-204ENST00000547687 GRXCR1A8MXD5 290 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 ADRB2P07550 413 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 CXCR5P32302 372 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 MCCD1P59942 119 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 VSNL1P62760 191 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 PTPN11Q06124 597 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 SNRNP35Q16560 246 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 ARHGAP44Q17R89 818 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 ZNF668Q96K58 619 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 PSMB7Q99436 277 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 UBE2TQ9NPD8 197 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 ATP8B3O60423 1300 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 H2AFZP0C0S5 128 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 SMIM10L2AP0DMW4 78 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 SMIM10L2BP0DMW5 78 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 GARTP22102 1010 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 IFI16Q16666 785 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 EPC2Q52LR7 807 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 WDR93Q6P2C0 686 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 H2AFVQ71UI9 128 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 ZNF572Q7Z3I7 529 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 DEFB123Q8N688 67 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 SLC30A5Q8TAD4 765 aa17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 TARS2Q9BW92 718 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-204ENST00000547687 COL1A2P08123 1366 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 GRID2IPA4D2P6 1211 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 PMM2O15305 246 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 FTCDO95954 541 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 C2orf54Q08AI8 447 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 BEND6Q5SZJ8 279 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 MEI1Q5TIA1 1274 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 CCDC181Q5TID7 509 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 CDCA2Q69YH5 1023 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 DNAAF5Q86Y56 855 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 LNX1Q8TBB1 728 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 FBXL18Q96ME1 805 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 FUT8Q9BYC5 575 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 TMEM117Q9H0C3 514 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 ABCB6Q9NP58 842 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 INTUQ9ULD6 942 aa17.8■□□□□ 0.44
CHMP1A-204ENST00000547687 TTLL13PA6NNM8 815 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 FOXN3O00409 490 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 MAGEB2O15479 319 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 SASH3O75995 380 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 PIGRP01833 764 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 PAFAH1B1P43034 410 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 NOP2P46087 812 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 PLA2G4AP47712 749 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 EFNA5P52803 228 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 ITIH3Q06033 890 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 PPFIA1Q13136 1202 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 GRIK4Q16099 956 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 SETD4Q9NVD3 440 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 STYXL1Q9Y6J8 313 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 MYH10P35580 1976 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 TARSL2A2RTX5 802 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 TULP1O00294 542 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 TREHO43280 583 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 IQCF3P0C7M6 154 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 MXI1P50539 228 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 MARCH8Q5T0T0 291 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 GLYCTKQ8IVS8 523 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms