RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CYP3A43Q9HB55 503 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 XPNPEP3Q9NQH7 507 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 TRIM10Q9UDY6 481 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 LCMT1Q9UIC8 334 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 ITGA11Q9UKX5 1188 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 GABRQQ9UN88 632 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 HYOU1Q9Y4L1 999 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 PCDHB4Q9Y5E5 795 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 PCDHGC5Q9Y5F6 944 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 DUSP10Q9Y6W6 482 aa14.42□□□□□ -0.1
PTCH1-215ENST00000547672 MROH7Q68CQ1 1323 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 CEP350Q5VT06 3117 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 TTLL13PA6NNM8 815 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 CES2O00748 559 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 AOC2O75106 756 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 MOCS3O95396 460 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 SGPL1O95470 568 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 TBC1D8O95759 1140 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 STAU1O95793 577 aaKnown RBP14.41□□□□□ -0.1
PTCH1-215ENST00000547672 FTLP02792 175 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-215ENST00000547672 CTGFP29279 349 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 TNFSF9P41273 254 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 GALCP54803 685 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 HADHBP55084 474 aaKnown RBP14.41□□□□□ -0.1
PTCH1-215ENST00000547672 RBP5P82980 135 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 CACNB2Q08289 660 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-215ENST00000547672 TMEM132DQ14C87 1099 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 ZNF699Q32M78 642 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 ZBTB41Q5SVQ8 909 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 EEF1DP3Q658K8 133 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 RAET1EQ8TD07 263 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 EPS8L1Q8TE68 723 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 DNAJB3Q8WWF6 145 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 VCPIP1Q96JH7 1222 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 SELENOOQ9BVL4 669 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 CARD6Q9BX69 1037 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 CELF4Q9BZC1 486 aaKnown RBP14.41□□□□□ -0.1
PTCH1-215ENST00000547672 RNF186Q9NXI6 227 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 NOCTQ9UK39 431 aaKnown RBP14.41□□□□□ -0.1
PTCH1-215ENST00000547672 SNX12Q9UMY4 172 aa14.41□□□□□ -0.1
PTCH1-215ENST00000547672 A0A0U1RQJ8 604 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 LACTBL1A8MY62 500 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 MED7O43513 233 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ABL1P00519 1130 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 IQCF3P0C7M6 154 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ATF7P17544 494 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-215ENST00000547672 MCM3P25205 808 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ZNF667Q5HYK9 610 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ACAD10Q6JQN1 1059 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 TRPV1Q8NER1 839 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 LNX1Q8TBB1 728 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ATRIPQ8WXE1 791 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 RABGGTAQ92696 567 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ZNF668Q96K58 619 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-215ENST00000547672 PBKQ96KB5 322 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 TSEN34Q9BSV6 310 aaKnown RBP14.4□□□□□ -0.1
PTCH1-215ENST00000547672 PI4K2AQ9BTU6 479 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ZNF518BQ9C0D4 1074 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 MTMR12Q9C0I1 747 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 VRTNQ9H8Y1 702 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 CHST12Q9NRB3 414 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 ARGLU1Q9NWB6 273 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-215ENST00000547672 SAGE1Q9NXZ1 904 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 UVRAGQ9P2Y5 699 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 GTF2IRD1Q9UHL9 959 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 KIAA1257Q9ULG3 409 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 CEP83Q9Y592 693 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 NCANO14594 1321 aa14.4□□□□□ -0.1
PTCH1-215ENST00000547672 TREHO43280 583 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 FKTNO75072 461 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 TRPA1O75762 1119 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 PALMO75781 387 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 CD4P01730 458 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 CXCL8P10145 99 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
PTCH1-215ENST00000547672 OSTNP61366 133 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 AMPD2Q01433 879 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 ITIH3Q06033 890 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 SNX17Q15036 470 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 RPS6KA1Q15418 735 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 SEZ6Q53EL9 994 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 LIN9Q5TKA1 542 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 LMBRD2Q68DH5 695 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-215ENST00000547672 NOP9Q86U38 636 aaKnown RBP14.39□□□□□ -0.11
PTCH1-215ENST00000547672 GPR161Q8N6U8 529 aaKnown RBP14.39□□□□□ -0.11
PTCH1-215ENST00000547672 SLAIN1Q8ND83 568 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 KLHDC9Q8NEP7 349 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 BEST2Q8NFU1 509 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 CAGE1Q8TC20 777 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 ZBTB10Q96DT7 871 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 CPB2Q96IY4 423 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 ARHGAP39Q9C0H5 1083 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 GINS2Q9Y248 185 aa14.39□□□□□ -0.11
PTCH1-215ENST00000547672 MOXD2PA6NHM9 499 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 GPR182O15218 404 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms