RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 F8W810 466 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 THP07101 528 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 MYOGP15173 224 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 TNNI1P19237 187 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 COPB1P53618 953 aaKnown RBP17.65■□□□□ 0.42
LETMD1-205ENST00000546992 KCNH2Q12809 1159 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 ZACNQ401N2 412 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 SV2AQ7L0J3 742 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 CMTR2Q8IYT2 770 aaKnown RBP17.65■□□□□ 0.42
LETMD1-205ENST00000546992 URGCPQ8TCY9 931 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 SP7Q8TDD2 431 aaPredicted RBP17.65■□□□□ 0.42
LETMD1-205ENST00000546992 RABGGTAQ92696 567 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 ELMO3Q96BJ8 720 aa17.65■□□□□ 0.42
LETMD1-205ENST00000546992 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
LETMD1-205ENST00000546992 UBQLN1Q9UMX0 589 aaKnown RBP17.65■□□□□ 0.42
LETMD1-205ENST00000546992 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.65■□□□□ 0.42
LETMD1-205ENST00000546992 MRPL42Q9Y6G3 142 aaKnown RBP17.65■□□□□ 0.42
LETMD1-205ENST00000546992 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.42
LETMD1-205ENST00000546992 CASTOR2A6NHX0 329 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 GOLGA6L19H0YKK7 550 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 TMEM191BP0C7N4 346 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 FMO5P49326 533 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 TUSC3Q13454 348 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 TRAPPC11Q7Z392 1133 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 SPRED2Q7Z698 418 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 NT5DC4Q86YG4 428 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 COLGALT2Q8IYK4 626 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 TDHQ8IZJ6 230 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 LRRC43Q8N309 656 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 C3orf58Q8NDZ4 430 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 TSPAN18Q96SJ8 248 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 YME1L1Q96TA2 773 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 VPS16Q9H269 839 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 DPP3Q9NY33 737 aa17.64■□□□□ 0.41
LETMD1-205ENST00000546992 ANO9A1A5B4 782 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 LRRC10BA6NIK2 292 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 TLL1O43897 1013 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 AFPP02771 609 aaKnown RBP17.63■□□□□ 0.41
LETMD1-205ENST00000546992 ITGB3P05106 788 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 PRKCSHP14314 528 aaPredicted RBP17.63■□□□□ 0.41
LETMD1-205ENST00000546992 CYP3A5P20815 502 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 PBX2P40425 430 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 PBX3P40426 434 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 MXI1P50539 228 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 FANCCQ00597 558 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 DUOXA2Q1HG44 320 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 VWA3BQ502W6 1294 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 CD300LGQ6UXG3 332 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 BEST2Q8NFU1 509 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 TAS1R2Q8TE23 839 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 SEMA4DQ92854 862 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 ANKRD36BP1Q96IX9 119 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
LETMD1-205ENST00000546992 MRPL9Q9BYD2 267 aaKnown RBP17.63■□□□□ 0.41
LETMD1-205ENST00000546992 NDST4Q9H3R1 872 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 TMEM8AQ9HCN3 771 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 KANSL3Q9P2N6 904 aa17.63■□□□□ 0.41
LETMD1-205ENST00000546992 YBX2Q9Y2T7 364 aaKnown RBP17.63■□□□□ 0.41
LETMD1-205ENST00000546992 COL4A4P53420 1690 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-205ENST00000546992 LGALS16A8MUM7 142 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 CST3P01034 146 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-205ENST00000546992 TNNC2P02585 160 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 ITGB1P05556 798 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
LETMD1-205ENST00000546992 LRPAP1P30533 357 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 POLR2BP30876 1174 aaKnown RBP17.62■□□□□ 0.41
LETMD1-205ENST00000546992 GTF2H1P32780 548 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 SLC11A1P49279 550 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 CLCNKBP51801 687 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 MYL7Q01449 175 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 BTG3Q14201 252 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-205ENST00000546992 PTPN21Q16825 1174 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 EPC2Q52LR7 807 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 C9orf57Q5W0N0 161 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 TMEM173Q86WV6 379 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-205ENST00000546992 BCL7CQ8WUZ0 217 aaPredicted RBP17.62■□□□□ 0.41
LETMD1-205ENST00000546992 RSPH1Q8WYR4 309 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 RAD9AQ99638 391 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 ZBED2Q9BTP6 218 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 SLC38A7Q9NVC3 462 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 MARCH5Q9NX47 278 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 INSL6Q9Y581 213 aa17.62■□□□□ 0.41
LETMD1-205ENST00000546992 FSD2A1L4K1 749 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 PIRO00625 290 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 TEX33O43247 280 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 ZC3H11AO75152 810 aaKnown RBP eCLIP17.61■□□□□ 0.41
LETMD1-205ENST00000546992 HLA-DRAP01903 254 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 AP3M2P53677 418 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 TPM4P67936 248 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 RNASELQ05823 741 aaKnown RBP17.61■□□□□ 0.41
LETMD1-205ENST00000546992 UPP1Q16831 310 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 KRT39Q6A163 491 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 USP37Q86T82 979 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 LMO3Q8TAP4 145 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 ITGA11Q9UKX5 1188 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 COQ4Q9Y3A0 265 aa17.61■□□□□ 0.41
LETMD1-205ENST00000546992 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
LETMD1-205ENST00000546992 A0A1B0GTH6 734 aa17.6■□□□□ 0.41
LETMD1-205ENST00000546992 LINC01553A4QN01 128 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms