RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 C3orf58Q8NDZ4 430 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 C18orf25Q96B23 403 aaPredicted RBP17.3■□□□□ 0.36
DDX54-204ENST00000546898 C7orf25Q9BPX7 421 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 APOL5Q9BWW9 433 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
DDX54-204ENST00000546898 TMEM206Q9H813 350 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 MAN1C1Q9NR34 630 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 AGO2Q9UKV8 859 aaKnown RBP17.3■□□□□ 0.36
DDX54-204ENST00000546898 C5orf42Q9H799 3197 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 MYBP10242 640 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 LRPAP1P30533 357 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 CASP5P51878 434 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 ASIC1P78348 528 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 ZBTB41Q5SVQ8 909 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 PRSS55Q6UWB4 352 aaPredicted RBP17.29■□□□□ 0.36
DDX54-204ENST00000546898 C15orf39Q6ZRI6 1047 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 CEP57Q86XR8 500 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 CMASQ8NFW8 434 aaPredicted RBP17.29■□□□□ 0.36
DDX54-204ENST00000546898 LNX1Q8TBB1 728 aaPredicted RBP17.29■□□□□ 0.36
DDX54-204ENST00000546898 POMGNT1Q8WZA1 660 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 KIF12Q96FN5 646 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 PLEKHA4Q9H4M7 779 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 TUBGCP4Q9UGJ1 667 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 DERAQ9Y315 318 aa17.29■□□□□ 0.36
DDX54-204ENST00000546898 LACTBL1A8MY62 500 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 LOC730098B7Z3J9 87 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 TISP43B9A030 160 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 SYN3O14994 580 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 GARTP22102 1010 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 CMA1P23946 247 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 BRCC3P46736 316 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 KCNA1Q09470 495 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 ATAT1Q5SQI0 421 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 CYP26C1Q6V0L0 522 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 UNC13DQ70J99 1090 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 CEP57L1Q8IYX8 460 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 SYCP3Q8IZU3 236 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 RHOBTB2Q9BYZ6 727 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 ASB7Q9H672 318 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 MTRRQ9UBK8 725 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 USP25Q9UHP3 1055 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 NUB1Q9Y5A7 615 aa17.28■□□□□ 0.36
DDX54-204ENST00000546898 UBE4BO95155 1302 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 TSC2P49815 1807 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.36
DDX54-204ENST00000546898 TGM5O43548 720 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 LDHAP00338 332 aaKnown RBP17.27■□□□□ 0.36
DDX54-204ENST00000546898 PFKFB1P16118 471 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 RPL17P18621 184 aaKnown RBP17.27■□□□□ 0.36
DDX54-204ENST00000546898 ADSSP30520 456 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 ACOT2P49753 483 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 NUCB2P80303 420 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 FAM26FQ5R3K3 315 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 LILRA6Q6PI73 481 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 ANKS3Q6ZW76 656 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 GPR149Q86SP6 731 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 C12orf76Q8N812 135 aaPredicted RBP17.27■□□□□ 0.36
DDX54-204ENST00000546898 SUSD3Q96L08 255 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 CLSTN3Q9BQT9 956 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 FGFBP2Q9BYJ0 223 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 BACE2Q9Y5Z0 518 aa17.27■□□□□ 0.36
DDX54-204ENST00000546898 FAM237AA0A1B0GTK4 181 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 PVALEFA0A1B0GWK0 134 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 KIAA0391O15091 583 aaKnown RBP17.26■□□□□ 0.35
DDX54-204ENST00000546898 PRPF6O94906 941 aaKnown RBP17.26■□□□□ 0.35
DDX54-204ENST00000546898 PAPLNO95428 1278 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 SLFN14P0C7P3 912 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 ALADP13716 330 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 IGFBP6P24592 240 aaPredicted RBP17.26■□□□□ 0.35
DDX54-204ENST00000546898 TKTP29401 623 aaKnown RBP17.26■□□□□ 0.35
DDX54-204ENST00000546898 MCM4P33991 863 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 SPAG1Q07617 926 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 EHHADHQ08426 723 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 SPATA1Q5VX52 437 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 TMC5Q6UXY8 1006 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 NT5DC4Q86YG4 428 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 GLYCTKQ8IVS8 523 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 BEST2Q8NFU1 509 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 RPGRIP1Q96KN7 1286 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 C1QTNF1Q9BXJ1 281 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 IKZF4Q9H2S9 585 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 POMKQ9H5K3 350 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 ZDHHC7Q9NXF8 308 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 FBXW11Q9UKB1 542 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 HPSEQ9Y251 543 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 C2CD2Q9Y426 696 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 NR2E1Q9Y466 385 aa17.26■□□□□ 0.35
DDX54-204ENST00000546898 SCN1AP35498 2009 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 A0A1B0GVL5 298 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 PI4K2BG5E9Z4 385 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 I3L4J1 428 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 ACTN4O43707 911 aaKnown RBP17.25■□□□□ 0.35
DDX54-204ENST00000546898 IL18RAPO95256 599 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 MYL1P05976 194 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 PAX3P23760 479 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 RAB33AQ14088 237 aa17.25■□□□□ 0.35
DDX54-204ENST00000546898 TMEM132DQ14C87 1099 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms