RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 MTSS1LQ765P7 747 aa20.48■□□□□ 0.87
CHPT1-202ENST00000546490 GPR152Q8TDT2 470 aa20.48■□□□□ 0.87
CHPT1-202ENST00000546490 CFAP54Q96N23 3096 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 KRBA1A5PL33 1030 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 PROB1E7EW31 1015 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 PI15O43692 258 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 NBL1P41271 181 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 MATR3P43243 847 aaKnown RBP eCLIP20.47■□□□□ 0.872e-7■■■□□ 14.9
CHPT1-202ENST00000546490 ROR1Q01973 937 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 PABPC1LQ4VXU2 614 aaKnown RBP20.47■□□□□ 0.87
CHPT1-202ENST00000546490 VARS2Q5ST30 1063 aaKnown RBP20.47■□□□□ 0.87
CHPT1-202ENST00000546490 SLC8B1Q6J4K2 584 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 FGF13Q92913 245 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 BICD1Q96G01 975 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 CALML4Q96GE6 196 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 ZBTB45Q96K62 511 aaPredicted RBP20.47■□□□□ 0.87
CHPT1-202ENST00000546490 ARHGEF3Q9NR81 526 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 SLC2A4RGQ9NR83 387 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 ODF2LQ9ULJ1 636 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 ANK1P16157 1881 aa20.47■□□□□ 0.87
CHPT1-202ENST00000546490 H7C4K7 107 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 CLDN3O15551 220 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 BMP15O95972 392 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 NCKAP1LP55160 1127 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 CACNB1Q02641 598 aaPredicted RBP20.46■□□□□ 0.87
CHPT1-202ENST00000546490 FGF14Q92915 247 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 C18orf25Q96B23 403 aaPredicted RBP20.46■□□□□ 0.87
CHPT1-202ENST00000546490 TBC1D17Q9HA65 648 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 HCFC1R1Q9NWW0 138 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 KCNH3Q9ULD8 1083 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 ZFHX2Q9C0A1 2572 aaPredicted RBP20.46■□□□□ 0.87
CHPT1-202ENST00000546490 TSC2P49815 1807 aa20.46■□□□□ 0.87
CHPT1-202ENST00000546490 LRG1P02750 347 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 ELF1P32519 619 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 MCM4P33991 863 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 UBA7P41226 1012 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 MCL1Q07820 350 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 SEZ6Q53EL9 994 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 LARP1BQ659C4 914 aaKnown RBP20.45■□□□□ 0.86
CHPT1-202ENST00000546490 PARM1Q6UWI2 310 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 DTWD2Q8NBA8 298 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 RASSF8Q8NHQ8 419 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 ZNF461Q8TAF7 563 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 ITFG1Q8TB96 612 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.45■□□□□ 0.86
CHPT1-202ENST00000546490 PATJQ8NI35 1801 aa20.45■□□□□ 0.86
CHPT1-202ENST00000546490 NPHP3-ACAD11A0A0J9YXS1 232 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 WDR27A2RRH5 827 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 PRRG1O14668 218 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 MEFVO15553 781 aaPredicted RBP20.44■□□□□ 0.86
CHPT1-202ENST00000546490 CXCL8P10145 99 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 SCP2P22307 547 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 ANGPT1Q15389 498 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 SLC10A6Q3KNW5 377 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 ZNF280DQ6N043 979 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 PHLDB3Q6NSJ2 640 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 GPBP1Q86WP2 473 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 NPAS3Q8IXF0 933 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 ST13P5Q8NFI4 369 aaPredicted RBP20.44■□□□□ 0.86
CHPT1-202ENST00000546490 SUSD3Q96L08 255 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 TBC1D32Q96NH3 1257 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 REEP2Q9BRK0 252 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 DNMT3BQ9UBC3 853 aaKnown RBP20.44■□□□□ 0.86
CHPT1-202ENST00000546490 TUBGCP4Q9UGJ1 667 aa20.44■□□□□ 0.86
CHPT1-202ENST00000546490 TCHHQ07283 1943 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 ARHGEF37A1IGU5 675 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 K7ENM7 598 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 HNRNPDLO14979 420 aaKnown RBP20.43■□□□□ 0.86
CHPT1-202ENST00000546490 CLTAP09496 248 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 LIG4P49917 911 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 PPP2R3AQ06190 1150 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 ARSHQ5FYA8 562 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 HAUS6Q7Z4H7 955 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 APPL2Q8NEU8 664 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 KCNN1Q92952 543 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 PLEKHA5Q9HAU0 1116 aa20.43■□□□□ 0.86
CHPT1-202ENST00000546490 MRPS23Q9Y3D9 190 aaKnown RBP20.43■□□□□ 0.86
CHPT1-202ENST00000546490 PRR23AA6NEV1 266 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 ABLIM3O94929 683 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 FAM13AO94988 1023 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 KRT18P05783 430 aaKnown RBP20.42■□□□□ 0.86
CHPT1-202ENST00000546490 RHOP08100 348 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 ATF2P15336 505 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 LONP1P36776 959 aaKnown RBP20.42■□□□□ 0.86
CHPT1-202ENST00000546490 ARPP19P56211 112 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 DHX8Q14562 1220 aaKnown RBP20.42■□□□□ 0.86
CHPT1-202ENST00000546490 KYAT1Q16773 422 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 CTXN3Q4LDR2 81 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 TPGS2Q68CL5 300 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 FRMD5Q7Z6J6 570 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 ING5Q8WYH8 240 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 SHDQ96IW2 340 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 RPP25Q9BUL9 199 aaKnown RBP20.42■□□□□ 0.86
CHPT1-202ENST00000546490 PARVGQ9HBI0 331 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 FBXL5Q9UKA1 691 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 FANCMQ8IYD8 2048 aa20.42■□□□□ 0.86
CHPT1-202ENST00000546490 XPOTO43592 962 aaKnown RBP20.41■□□□□ 0.86
CHPT1-202ENST00000546490 TBC1D4O60343 1298 aa20.41■□□□□ 0.86
CHPT1-202ENST00000546490 TBCAO75347 108 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms