RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.09■□□□□ 0.01
SRP54-202ENST00000546080 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
SRP54-202ENST00000546080 C6orf229H3BNL8 230 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 TRAFD1O14545 582 aaPredicted RBP15.09■□□□□ 0.01
SRP54-202ENST00000546080 CYP11B1P15538 503 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 MUTP22033 750 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 MARK3P27448 753 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 PTPN4P29074 926 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 CDR2Q01850 454 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 PPP2R5CQ13362 524 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 RC3H1Q5TC82 1133 aaKnown RBP15.09■□□□□ 0.01
SRP54-202ENST00000546080 MFN1Q8IWA4 741 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 DENND1AQ8TEH3 1009 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 SLC5A5Q92911 643 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 SMC6Q96SB8 1091 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 RBM15Q96T37 977 aaKnown RBP eCLIP15.09■□□□□ 0.01
SRP54-202ENST00000546080 SYT15Q9BQS2 421 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 WDR18Q9BV38 432 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 STRA6Q9BX79 667 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 TRABDQ9H4I3 376 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 ZFP69BQ9UJL9 534 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 SMG5Q9UPR3 1016 aaKnown RBP15.09■□□□□ 0.01
SRP54-202ENST00000546080 ARHGEF35A5YM69 484 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 TISP43B9A030 160 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 POC1B-GALNT4F8VUJ3 575 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 PSMD10O75832 226 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 AP1G2O75843 785 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 KRT15P19012 456 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 CCDC6Q16204 474 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 SPDYAQ5MJ70 313 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 C1orf220Q5T0J3 134 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 CWF19L1Q69YN2 538 aaKnown RBP15.08■□□□□ 0.01
SRP54-202ENST00000546080 ACAD10Q6JQN1 1059 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 CCDC125Q86Z20 511 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 SHC3Q92529 594 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 VCXQ9H320 206 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 TMEM206Q9H813 350 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 STOML1Q9UBI4 398 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 GRID1Q9ULK0 1009 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 NRAPQ86VF7 1730 aa15.08■□□□□ 0.01
SRP54-202ENST00000546080 NVLO15381 856 aaKnown RBP15.08■□□□□ 0
SRP54-202ENST00000546080 HNRNPCL1O60812 293 aaKnown RBP15.08■□□□□ 0
SRP54-202ENST00000546080 GAS7O60861 476 aa15.08■□□□□ 0
SRP54-202ENST00000546080 SESN3P58005 492 aa15.08■□□□□ 0
SRP54-202ENST00000546080 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
SRP54-202ENST00000546080 MKL1Q969V6 931 aa15.08■□□□□ 0
SRP54-202ENST00000546080 CBWD1Q9BRT8 395 aa15.08■□□□□ 0
SRP54-202ENST00000546080 HEMGNQ9BXL5 484 aa15.08■□□□□ 0
SRP54-202ENST00000546080 TMEM117Q9H0C3 514 aa15.08■□□□□ 0
SRP54-202ENST00000546080 KIAA1586Q9HCI6 787 aa15.08■□□□□ 0
SRP54-202ENST00000546080 SAYSD1Q9NPB0 183 aa15.08■□□□□ 0
SRP54-202ENST00000546080 SENP1Q9P0U3 644 aa15.08■□□□□ 0
SRP54-202ENST00000546080 NYAP2Q9P242 653 aa15.08■□□□□ 0
SRP54-202ENST00000546080 WRAP73Q9P2S5 460 aaPredicted RBP15.08■□□□□ 0
SRP54-202ENST00000546080 NEU2Q9Y3R4 380 aa15.08■□□□□ 0
SRP54-202ENST00000546080 ANKRD33BA6NCL7 494 aa15.07■□□□□ 0
SRP54-202ENST00000546080 CA4P22748 312 aa15.07■□□□□ 0
SRP54-202ENST00000546080 SP100P23497 879 aaPredicted RBP15.07■□□□□ 0
SRP54-202ENST00000546080 GCAP28676 217 aa15.07■□□□□ 0
SRP54-202ENST00000546080 CNGA1P29973 690 aa15.07■□□□□ 0
SRP54-202ENST00000546080 VHLP40337 213 aa15.07■□□□□ 0
SRP54-202ENST00000546080 RAB27AP51159 221 aa15.07■□□□□ 0
SRP54-202ENST00000546080 SLC18A1P54219 525 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ROR2Q01974 943 aaKnown RBP15.07■□□□□ 0
SRP54-202ENST00000546080 SLC45A4Q5BKX6 768 aa15.07■□□□□ 0
SRP54-202ENST00000546080 HHATQ5VTY9 493 aa15.07■□□□□ 0
SRP54-202ENST00000546080 FYB2Q5VWT5 728 aa15.07■□□□□ 0
SRP54-202ENST00000546080 IRGCQ6NXR0 463 aa15.07■□□□□ 0
SRP54-202ENST00000546080 GSTA5Q7RTV2 222 aa15.07■□□□□ 0
SRP54-202ENST00000546080 C4orf33Q8N1A6 199 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ZCCHC9Q8N567 271 aaKnown RBP15.07■□□□□ 0
SRP54-202ENST00000546080 XXYLT1Q8NBI6 393 aa15.07■□□□□ 0
SRP54-202ENST00000546080 KIFAP3Q92845 792 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ARHGEF1Q92888 912 aaKnown RBP15.07■□□□□ 0
SRP54-202ENST00000546080 FAM118BQ9BPY3 351 aa15.07■□□□□ 0
SRP54-202ENST00000546080 FOXP3Q9BZS1 431 aa15.07■□□□□ 0
SRP54-202ENST00000546080 NMRK1Q9NWW6 199 aa15.07■□□□□ 0
SRP54-202ENST00000546080 DLGAP2Q9P1A6 1054 aa15.07■□□□□ 0
SRP54-202ENST00000546080 LNPEPQ9UIQ6 1025 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ATRNL1Q5VV63 1379 aa15.07■□□□□ 0
SRP54-202ENST00000546080 MROH7Q68CQ1 1323 aa15.07■□□□□ 0
SRP54-202ENST00000546080 RALAP11233 206 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ADRA2BP18089 450 aa15.07■□□□□ 0
SRP54-202ENST00000546080 RPA3P35244 121 aaPredicted RBP15.07■□□□□ 0
SRP54-202ENST00000546080 SLC1A1P43005 524 aa15.07■□□□□ 0
SRP54-202ENST00000546080 PKN2Q16513 984 aaKnown RBP15.07■□□□□ 0
SRP54-202ENST00000546080 CCNG2Q16589 344 aa15.07■□□□□ 0
SRP54-202ENST00000546080 SHROOM1Q2M3G4 852 aaPredicted RBP15.07■□□□□ 0
SRP54-202ENST00000546080 NLRP9Q7RTR0 991 aa15.07■□□□□ 0
SRP54-202ENST00000546080 TDRPQ86YL5 185 aa15.07■□□□□ 0
SRP54-202ENST00000546080 PLEKHO2Q8TD55 490 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ZNF333Q96JL9 665 aa15.07■□□□□ 0
SRP54-202ENST00000546080 TTC25Q96NG3 672 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ACCSQ96QU6 501 aa15.07■□□□□ 0
SRP54-202ENST00000546080 TLE6Q9H808 572 aa15.07■□□□□ 0
SRP54-202ENST00000546080 HSPBP1Q9NZL4 362 aa15.07■□□□□ 0
SRP54-202ENST00000546080 POLLQ9UGP5 575 aa15.07■□□□□ 0
SRP54-202ENST00000546080 ASB3Q9Y575 518 aa15.07■□□□□ 0
SRP54-202ENST00000546080 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.07■□□□□ 0
SRP54-202ENST00000546080 C2CD2LO14523 706 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms